Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2534 | ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCTATTACTCCATTAAACTGGTGGTATCTCCAGGCAAATTCTCTTTCTTCATGGAACGATACTAATAGCACATGGAACAACCAACCAAACCCTAATTCTTCCTCTTCTTGTGAGGAGGATATATCTGTCTCTACATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAGTCCTCTCGCAGACTCATTGAGCCACCAGCTCCTTCCTCCACCGAGTTGATGGGAGAACATGCTTCGGATAGTCAACTTTGGAGTCATGTTTTATCAGGTGTTGGATCAAACGGCGAGTTGCACAACAGCCAAGAAATTGGAGAGAACTTTCTGGATGCACTGTCATCCAAAAGCATGACAAGCACTATGTTTCAACCAGTGTGTGACTACTTGAAGAAAATTGATCATACAAGTTGGGAATACAGTGGTTCAACTTCACTAAATAGCTTTGAGAAGCACTTAAATGGGTTCAGTGAGGCGATGATTGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCTGACCCAGAAGTTAGTAGTAGCCACTTTGATCCACAAACAACAAACAACGTTAACATGCCCTTGAGTAATTCTTCCATGGATCACTTCCCACAATCTGAACACTTCAAGCAATTACCTTTTGGAGACTCAACAATATCATCATCATCATGCACTCTTGGAGGAGCAATTAGTAGAAACTCTGGATTATTGTTCCCTAATTGCTATGATCATGACATGAAGGTAAAGCAAGAGTATCATCCAAGTGAAGTGCCTCCAGGAGCTGTATTTGGAAAACCATTAAATACAAATGGATCATATCAAAATGGATTTAATAGCCTCTCAGTGGGTGATAGTAGCAAACTCTACCATGGGATATTGCCCAATATTACTTCATGCACAAGAAATTTCTCTGATGTTATATCCTTTAATAGTCGATTGGGAAGGCCAGTTATTGGAGTCCATGCTCAAAACCCTAGCATGAAGTACCTGAACGTATCTGAACCAAAGAAACAAGGTCTTCAGACACCATCATCGATAAGAAGTAATGTTAATGGAAAAGGAGGGGAGGGGACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTGAAAAAGCCTAAGCAAGATGCATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGAGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACCGATACAGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAAGTTAATTCTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGAGGAGACAAAGCTAGACCTTCGTAGCAGAGGCCTGTGTTTGGTTCCTACTTCATGTACTCCTCTAGTTTATAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA | 1569 | 0.4136 | MTEESAGNTVATSITPLNWWYLQANSLSSWNDTNSTWNNQPNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIEPPAPSSTELMGEHASDSQLWSHVLSGVGSNGELHNSQEIGENFLDALSSKSMTSTMFQPVCDYLKKIDHTSWEYSGSTSLNSFEKHLNGFSEAMIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDPQTTNNVNMPLSNSSMDHFPQSEHFKQLPFGDSTISSSSCTLGGAISRNSGLLFPNCYDHDMKVKQEYHPSEVPPGAVFGKPLNTNGSYQNGFNSLSVGDSSKLYHGILPNITSCTRNFSDVISFNSRLGRPVIGVHAQNPSMKYLNVSEPKKQGLQTPSSIRSNVNGKGGEGTTREVKKKRSEESSDAMLKKPKQDASTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKVNSHKDPWGSLDRKDKEETKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR | 522 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2534 | 522 | MobiDBLite | consensus disorder prediction | 354 | 411 | - | - | |
Aed1g2534 | 522 | PANTHER | TRANSCRIPTION FACTOR BHLH111 | 31 | 508 | - | - | |
Aed1g2534 | 522 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 31 | 508 | - | - | |
Aed1g2534 | 522 | MobiDBLite | consensus disorder prediction | 377 | 396 | - | - | |
Aed1g2534 | 522 | MobiDBLite | consensus disorder prediction | 33 | 53 | - | - | |
Aed1g2534 | 522 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 401 | 450 | IPR011598 | GO:0046983 | |
Aed1g2534 | 522 | CDD | bHLH_AtbHLH_like | 416 | 458 | IPR045239 | - | |
Aed1g2534 | 522 | MobiDBLite | consensus disorder prediction | 354 | 375 | - | - | |
Aed1g2534 | 522 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 416 | 467 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2534 | Aed-Chr1 | 21024314 | 21027532 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2534 | 23 | 522 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G31050 | 33.333 | 7.62e-48 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2534 | - | - | gmx:100527800 | 892.878 |