Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2534 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCTATTACTCCATTAAACTGGTGGTATCTCCAGGCAAATTCTCTTTCTTCATGGAACGATACTAATAGCACATGGAACAACCAACCAAACCCTAATTCTTCCTCTTCTTGTGAGGAGGATATATCTGTCTCTACATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAGTCCTCTCGCAGACTCATTGAGCCACCAGCTCCTTCCTCCACCGAGTTGATGGGAGAACATGCTTCGGATAGTCAACTTTGGAGTCATGTTTTATCAGGTGTTGGATCAAACGGCGAGTTGCACAACAGCCAAGAAATTGGAGAGAACTTTCTGGATGCACTGTCATCCAAAAGCATGACAAGCACTATGTTTCAACCAGTGTGTGACTACTTGAAGAAAATTGATCATACAAGTTGGGAATACAGTGGTTCAACTTCACTAAATAGCTTTGAGAAGCACTTAAATGGGTTCAGTGAGGCGATGATTGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCTGACCCAGAAGTTAGTAGTAGCCACTTTGATCCACAAACAACAAACAACGTTAACATGCCCTTGAGTAATTCTTCCATGGATCACTTCCCACAATCTGAACACTTCAAGCAATTACCTTTTGGAGACTCAACAATATCATCATCATCATGCACTCTTGGAGGAGCAATTAGTAGAAACTCTGGATTATTGTTCCCTAATTGCTATGATCATGACATGAAGGTAAAGCAAGAGTATCATCCAAGTGAAGTGCCTCCAGGAGCTGTATTTGGAAAACCATTAAATACAAATGGATCATATCAAAATGGATTTAATAGCCTCTCAGTGGGTGATAGTAGCAAACTCTACCATGGGATATTGCCCAATATTACTTCATGCACAAGAAATTTCTCTGATGTTATATCCTTTAATAGTCGATTGGGAAGGCCAGTTATTGGAGTCCATGCTCAAAACCCTAGCATGAAGTACCTGAACGTATCTGAACCAAAGAAACAAGGTCTTCAGACACCATCATCGATAAGAAGTAATGTTAATGGAAAAGGAGGGGAGGGGACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTGAAAAAGCCTAAGCAAGATGCATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGAGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACCGATACAGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAAGTTAATTCTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGAGGAGACAAAGCTAGACCTTCGTAGCAGAGGCCTGTGTTTGGTTCCTACTTCATGTACTCCTCTAGTTTATAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1569 0.4136 MTEESAGNTVATSITPLNWWYLQANSLSSWNDTNSTWNNQPNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIEPPAPSSTELMGEHASDSQLWSHVLSGVGSNGELHNSQEIGENFLDALSSKSMTSTMFQPVCDYLKKIDHTSWEYSGSTSLNSFEKHLNGFSEAMIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDPQTTNNVNMPLSNSSMDHFPQSEHFKQLPFGDSTISSSSCTLGGAISRNSGLLFPNCYDHDMKVKQEYHPSEVPPGAVFGKPLNTNGSYQNGFNSLSVGDSSKLYHGILPNITSCTRNFSDVISFNSRLGRPVIGVHAQNPSMKYLNVSEPKKQGLQTPSSIRSNVNGKGGEGTTREVKKKRSEESSDAMLKKPKQDASTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKVNSHKDPWGSLDRKDKEETKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2534 522 MobiDBLite consensus disorder prediction 354 411 - -
Aed1g2534 522 PANTHER TRANSCRIPTION FACTOR BHLH111 31 508 - -
Aed1g2534 522 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 508 - -
Aed1g2534 522 MobiDBLite consensus disorder prediction 377 396 - -
Aed1g2534 522 MobiDBLite consensus disorder prediction 33 53 - -
Aed1g2534 522 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 401 450 IPR011598 GO:0046983
Aed1g2534 522 CDD bHLH_AtbHLH_like 416 458 IPR045239 -
Aed1g2534 522 MobiDBLite consensus disorder prediction 354 375 - -
Aed1g2534 522 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 416 467 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2534 Aed-Chr1 21024314 21027532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2534 23 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.333 7.62e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2534 - - gmx:100527800 892.878