Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2513 ATGATTAACTCTGTTTCAGAAAACAGTTTCATCATTGAGAGTGATGAAGAAGACGAGGAGAAGGAGTTGAACAAAGGTGGAGGTGATGGCAACGATTCTGATTCTTCCAATTACTCAAATGAAAACCCTCCACAGAGAAAACCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATATAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACACCCTCATTGTCAAGACTAAGCAGTTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCATTCAGTGACAAAGCCTTTGATACAAGACACAGAAGATGAGCAGCACCAGAGACGAAGCTCTCACACCTTGCTTCCTCCAATTCCTTCTAGAAGGTCTTCTTCGATTAAGAAGGATTCCAAGGTTGCTCATCATGGACATGAAGTTCCCTCTCGCCACTGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAACGTTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCAAAAGTAGGTGGATGGCTTGGGCTTTCTATCTTGTTCCTTTTTGCAATTATTTCATTTTATACTGGTCTGCTCTTGCGTTCCTGCTTGGAAAGTGAACCTGAGCTTGAGACATACCCTGATATTGGCCAAGCTGCTTTTGGTAAAACTGGACGTATTGCCATTTCAATAGTATTGTACGTGGAATTGTATGCTTGTTGCATTGAATATATAATTTTGGAGGGTGACAACTTGTCTTCCTTATTTCCAAGTGCACACTTGAATTTGGGTGGAATTGAACTGAATTCACATACACTATTTGCTGTGATCACTACCTTGGCTGTTCTTCCTACTGTGTGGCTCCGTGACCTAAGCGTTCTCAGTTACATATCCGCTGGTGGAGTTGTTGCATCAATTCTAGTGGTTCTCTGCTTGTTATGGGTTGGCGTCGAGGACGTAGGCTTTCATAGCAAAGGCACCACACTCAACCTTACAAGTCTTCCTGTTGCTGTTGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTGTTCCCAAACATTTACACATCCATGGCAAATCCAAACCAATTCCCTATAGTGCTCTTTGCATGTTTTGGTATTTGTACCTTATTGTATGCTGGAGCTGCTGTAATGGGATACACAATGTTTGGAGAAGCTATACTGTCTCAGTTCACTCTTAACATGCCTACAGAATTGGTAGCCACCAAGATTGCTGTCTGGACTACGAACAGGGCTAGTACTTTCCACCCTGCTTATTGGTCTCTCGGTTCCCTTTTTTGGTCTGGTGATGTCACTGATTGGATCATTACTCACAATGCTTGTTGTATGTTCCATTCAGTTTATCTAATCTTGCGGGGCAAAGTGACACGAACACAGGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTGGAACATACTCTGCCCTCGCTGAGATTGTGAAGAGTTTGAAGGGATGA 1518 0.4289 MINSVSENSFIIESDEEDEEKELNKGGGDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEALHSVTKPLIQDTEDEQHQRRSSHTLLPPIPSRRSSSIKKDSKVAHHGHEVPSRHCSFGQAVLNGINVLCGVGILSTPYAAKVGGWLGLSILFLFAIISFYTGLLLRSCLESEPELETYPDIGQAAFGKTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPSAHLNLGGIELNSHTLFAVITTLAVLPTVWLRDLSVLSYISAGGVVASILVVLCLLWVGVEDVGFHSKGTTLNLTSLPVAVGLYGYCYSGHAVFPNIYTSMANPNQFPIVLFACFGICTLLYAGAAVMGYTMFGEAILSQFTLNMPTELVATKIAVWTTNRASTFHPAYWSLGSLFWSGDVTDWIITHNACCMFHSVYLILRGKVTRTQAALCITIITVGVVCSAFGTYSALAEIVKSLKG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2513 505 PANTHER - 464 502 - -
Aed1g2513 505 MobiDBLite consensus disorder prediction 29 53 - -
Aed1g2513 505 PANTHER - 26 429 - -
Aed1g2513 505 MobiDBLite consensus disorder prediction 1 53 - -
Aed1g2513 505 PANTHER OS05G0424000 PROTEIN-RELATED 464 502 - -
Aed1g2513 505 Pfam Transmembrane amino acid transporter protein 157 419 IPR013057 -
Aed1g2513 505 PANTHER OS05G0424000 PROTEIN-RELATED 26 429 - -
Aed1g2513 505 MobiDBLite consensus disorder prediction 101 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2513 Aed-Chr1 20812992 20820064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2513 6 423 Amino Acid or Auxin Permease AAAP Family AT2G39130 69.575 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2513 K15015 - gmx:100775840 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2513 1 20812992 20820064 Aed1g2513 1 20812992 20820064 ECH