Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2507 ATGTGCAAATCCAAAAAGAGCACCAGCGTGGTCCAACCCAGAACCCGAAGAAGCAACACCAACACAAACAAGACCAATTCCCCTCGTCCTCACCGAACACGAACCCCAACATCGTCATCTTCTTCGAACTACGATACCTCTACCAGTGATGTTCCAATCACAGAATCAAGAAGTTACGTATTCACCAACTACGACTTTGAGTGGTCCAAAACCTCATCAATTTCAAGCCGCGCCTCTCTCTCGAGCCTTAAAGACACGCTCCCTGAAAACCCTAACATCTACCACTTGTCCGAGATCTCCGCCGCCACCGCTAATTTCTCCGCGCCCAGCCTCACCTCTTCCTCCTGGCGCTGCGTAATTCGCCACCGCGACGTCGTCGTTTCGCGCCGCAACTTCCGCCAGCAAATTGATCTAATAGAGGTCAGCCGCCGACTCGCCCTGATCTGCCGGAGCCACCACAGCAGCCTCGTGAAACTCCTCGGAGCGTCGGTCTCCGGCGCCGTCATCTTCCTCGTCTACGAATTCGTCCCCGGCGCCAGCCTCGCCGACTGCCTCCGCAACCGCCGGAACCCTAGCTTCACCGATCTCCGCACGTGGATCTCGCGGATGCAGATCGCGTCCGACGTGGCGCACGGCCTCGATTACATCCACAATTTCTCCGGTTCCGGTTCCGGTTCCGGTTCTGGATTTGGATTCGTTCACAATCACATCAAAAGTTCGAGCATTGTTATCACGGAGGATCATTTGCGCGCCAAAATCTGCCACTTCGGCGCGTCGGATCTCTGCGGTGAGGCCGTTGCCGGTGATGGCGAGCCTTCCGGTGGCCGGATGGTGAGGATCGAGGGGAGGAGAGGCTACATGGCGCCGGAGTTTCAAATCAGCGGCGTCGCGACGAAGAAGACCGACGTGTACGCGTTCGGCGTGGTGGTTTTGGAGCTGCTGAGCGGGGAAGAGGCGGTGAAATTCGAATTTAACGACGACGGCGGTTATAGGAGAATTAGCGTGGTGGATACGGCGAGGGTAGCGGTGGAGGAGAACGGCGGCGTGAGGAAGTGGGTGGATAAGAGACTGAGGGATTCGTTTCCCGTGAATGTTGCGGAGAGAATGATTCAGATCGGGCTGGAGTGTGTCGGAGATGATCCGATCGAGAGACCCGATATGGGTCGGGTTTCAAATGAGGTGTCAAAGTTGTATTTGCAATCGAATGAGTGGGATGAGAAAATGGGAACCGATATTGACTTGTCGGTCTCGTTGGTCCCACGGTGA 1266 0.5592 MCKSKKSTSVVQPRTRRSNTNTNKTNSPRPHRTRTPTSSSSSNYDTSTSDVPITESRSYVFTNYDFEWSKTSSISSRASLSSLKDTLPENPNIYHLSEISAATANFSAPSLTSSSWRCVIRHRDVVVSRRNFRQQIDLIEVSRRLALICRSHHSSLVKLLGASVSGAVIFLVYEFVPGASLADCLRNRRNPSFTDLRTWISRMQIASDVAHGLDYIHNFSGSGSGSGSGFGFVHNHIKSSSIVITEDHLRAKICHFGASDLCGEAVAGDGEPSGGRMVRIEGRRGYMAPEFQISGVATKKTDVYAFGVVVLELLSGEEAVKFEFNDDGGYRRISVVDTARVAVEENGGVRKWVDKRLRDSFPVNVAERMIQIGLECVGDDPIERPDMGRVSNEVSKLYLQSNEWDEKMGTDIDLSVSLVPR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2507 421 MobiDBLite consensus disorder prediction 1 51 - -
Aed1g2507 421 PANTHER OS09G0572100 PROTEIN 1 421 - -
Aed1g2507 421 Gene3D Transferase(Phosphotransferase) domain 1 177 416 - -
Aed1g2507 421 ProSiteProfiles Protein kinase domain profile. 68 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2507 421 PANTHER OS09G0572100 PROTEIN 1 421 - -
Aed1g2507 421 SUPERFAMILY Protein kinase-like (PK-like) 128 394 IPR011009 -
Aed1g2507 421 Gene3D Phosphorylase Kinase; domain 1 67 175 - -
Aed1g2507 421 Pfam Protein tyrosine and serine/threonine kinase 137 392 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2507 Aed-Chr1 20771669 20772934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2507 89 419 Receptor kinase-like Gene Family AT1G51940 32.754 1.45e-45 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed1g2507 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2507 - - gmx:100820374 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2507 1 20771669 20772934 Aed1g2507 1 20771669 20772934 ECH