Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2500 ATGGAAATCACAATAACATCAAGAGAAACAATCAAACCATTGTCCCCTACAACAGATGATCACAGATTCTTCCAACTCTCTTTGTTTGATCAGCTTCAACTTGTGACCTATTTGCCAATGGTTTTGTTTTACCCCAACAAGGAAGGTTTTCCAAAACCCTCTAATATATGTGCTCAATTGAAACAATCATTGTCTGAGACACTAACAATTTTCTACCCTGTAGCAGGAAGAAGAGAAAACCACACCTTCATCACTTGCAATGATGAGGGTGCTCTTTACTTGGAAGCCAAGGTAAACCTTAACATGGTTGAGTTCCTCACACCACCTAAGCTAGAATTTCTAAACAAATTGCTCCCATGTGAGCCTAACAAGATGCACTCACATAGAGAAGCCTTACCCCAAGCACTTGTACAAGTTAACATGTTCAATTGTGGTGGAATAGCTATTGGAACATGCAATCTACATACTCTTCTTGATGGTTGCTCTGCCAGCCTCTTCCAAACTACTTGGGCTGCTATATGCCGCTGCTCTAAGGAGGAAGTTCCACCTCCTGATTTCAGTTCCGCCTCTTCTTTTTTTCCACCGTTGAATGATTTGTGTTTGAATGACCATGTTGATCAAACTAATGAGGATTCAAGTGCACAAAAGATGTGCACCACTAGAAGATATGAAGCACTGGCTGCATTCATTTGGAAACACATGACACTTGCATGCAAGATGGAGGAGTTTGATAGTGATAGCACAAGACCAGCAGTCGCTATACATATTGTGGACATGAGGAGGAGGATTGGTGAGCCTTTCTCTAGATGCACCATTGGCAACATTTTGTGGCCAGTGATGGTGTTTTGTGAAACACTCAATGAAGACACTTGTGTAAGATATTTGGTTAGCATTGCACGAGAGAAATTTGGGAAGCTTTCAAAGGAATTGTTTTTGAGAGTGAAGAGTGATCCTAGTATCCTTGGGAGCACTCAGTGTGTGGATCTGCCTCAAGGTATAGAAACAAGAAGTCCAATTCCAACTGTGTTGACAAGTTGGTGTGGCTTGAATTTCAGTGAGCTAGATTTTGGTTTTGGGAAGCCTTTTTGGGTTGGTGTTAGAGGAGGGGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATGGAAACAGATGCTGGCATGGAAGCTTGGTTGACTATGGAAATGCAACATATTGCTAACTTGGAAAGAGACACTCAGTTTCTTAGATTAGCTTTGCCTAATCCTAGTGTTTCAAACATTTAA 1263 0.4141 MEITITSRETIKPLSPTTDDHRFFQLSLFDQLQLVTYLPMVLFYPNKEGFPKPSNICAQLKQSLSETLTIFYPVAGRRENHTFITCNDEGALYLEAKVNLNMVEFLTPPKLEFLNKLLPCEPNKMHSHREALPQALVQVNMFNCGGIAIGTCNLHTLLDGCSASLFQTTWAAICRCSKEEVPPPDFSSASSFFPPLNDLCLNDHVDQTNEDSSAQKMCTTRRYEALAAFIWKHMTLACKMEEFDSDSTRPAVAIHIVDMRRRIGEPFSRCTIGNILWPVMVFCETLNEDTCVRYLVSIAREKFGKLSKELFLRVKSDPSILGSTQCVDLPQGIETRSPIPTVLTSWCGLNFSELDFGFGKPFWVGVRGGDQETLPNVAVIMETDAGMEAWLTMEMQHIANLERDTQFLRLALPNPSVSNI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2500 420 Pfam Transferase family 1 210 - -
Aed1g2500 420 Gene3D - 1 202 IPR023213 -
Aed1g2500 420 PANTHER F21J9.9 5 223 - -
Aed1g2500 420 PANTHER F21J9.9 221 415 - -
Aed1g2500 420 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 221 415 - -
Aed1g2500 420 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 223 - -
Aed1g2500 420 Gene3D - 203 409 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2500 Aed-Chr1 20723671 20725194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2500 60 403 Monolignol Biosynthesis Gene Families AT5G48930 22.396 1.87e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2500 - K13065 gmx:102668997 740.725