Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2475 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCGCTTGGGTCCGTCGCGAGATGGAGGGATTCCTCGCACCACCGCGACTTCAATCGTTGGGGATCCGCCGAGTTTCGCAGACCACCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAGGAATCTGGTCATGGTTATGCGATTTCTCGGTCCAGCAGCGACAAGATGCTTGAAGAAGATAGTCGGCCGTCGATCTCACGGGGTGATGGAAAGTATGGCAGGAGCGGTAGGGAAAATAGAGGAGGACCCTTTGGTCAGAGAGATTGGAGAGGGCATTCGTGGGAACCCACTAATGGTTCTATGAATTTGCCCAGGAGGCAGCAGGATGTGAACAATGACCAGAGGTCAGTAGATGATGCCCTAGCATATTCCTCTCATCCACATTCCGATTTTGGCAACGCTTGGGATCAACACCACTTGAAAGACCAGCATGATAATAAGATGGGTGGTGTCAATGGGTTGGGAACAGGTCCAAGATGCGATAGAGAAAACTCTCTGGGTGACTGGAAGCCACTAAAATGGACCCGTTCTGGAAGCTTGTCATCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAAGAGCATGGGAGGAGCAGATTCCCATGAAGCGAAGGCTGAGTTGCAACCCAAAAGTGCTGCTGCCAATGAGTCACATTCAGGGGAAGCTGCTGCTTGTGGGACATCTTCTGTGCCATCTGAGGATACAACTTCTAGAAAAAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAGTTGAGGTGCCTGATGCAAGTGCAAACAAAGATGGTCCTGTCCTGTCTACTGGTAACACAGAACCTTGTAATTTCCTCAGTCCCAGCTTAGTTGATAAAAGCCCAAAAGTTGCAGGAATTTCAGAATGTGCATCTCCGGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCTGGTATGGATGATAAATTATTTGGGAAGACTGCAAATGTGGACAATGATGTTAGTAATTTGACTGGTTCACCTGCTCCTGTGTCTGAAAATCATCTCGTGGGTTTTTCTCTTAACTTAGAGAAATTTGATATGTCATCCTTGAATAATTTGGGTTCTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTCTTGATTCTGGTCCAATGAGGTCCAATTCAATTAATAAGTTACTGATATGGAAAGCTGAGATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCACTGAAATCTGATTCGGGAGAAACATGTCCTTGTCCAGTAGCCTTGGGCTTCCAGATGGTAGGTAGTGATGAAAAATCCTGTGAAGACCACATTGGAGTCTCTGATCAGGTCATCCGGCCAGAACCGTTGAAAATTGGTGATGATCCCAATATGGAGAAGATGCCTCTTTCAACTAATTTACACAGTATTCATGAAAATGGCAAGGAAGAGGATATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTAATTAAAACAGTTTCTTGTGATACCAGGGGATATGATAACTTCTCCAGGGATTTGGATGCTGTTCAGTCTACAGCTGTGAAATTCCTAGTTCCTTGTACTACTAGGAAAGAATCTAGTGTGCCTGCCTGTGTTGATGGCAATACATCTATGGAGCCAAAGAATAGTAGCATGGATATTTTATATAAATCAATTATTTCTTCCAATAAAGAATCTGCCCACAGAGCTAGTGAGGTATTTGATAAGTTATTTCCCCAAGATTGTTTCAAGATTGAGAAGATGGAAGCAAGCAGTGACAAATGCACTCATACCTTCATTATGGAAAAATTTGCTGAGAAAAAGAGATTTGCAAGATTTAAGGAGAGAGTTATTGCACTTAAGTTCAGAGCTTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTGTTAGGAAATGCCGACCAAAATCTCACAAAAAAAATGAATTAAGTGTGCGATCTAGCTGTAATGGTAACCAGAAGAATCGATCGTCCATTCGATCACGTTTTCCCTTTCCTGCAGGAAATCAACTAAGCTTGGTTCCAACATCGGAGATAATTAATTTTACAAGCAAATTGCTTTCAGAATCCCAAGTTAAAGTGCAGAGAAACTCCCTGAAAATGCCAGCATTAATTTTGGATGAAAAAGAGAAGATTACTTCAAAGTTTGTATCCTGTAATGGTCTGGTTGAGGATCCATTGGCTACTGAGAAAGAAAGGTCTATGATCAATCCTTGGACCCCAAAAGAGAGAGAAGTTTTCTTGGAGAAATTTGCTACCTTTGGAAAAGATTTTCGAAAAATTTCTTCTTTTCTTGATCACAAGACGACTGCTGACTGTGTTGAATTCTACTACAAGAATCATAAATCTGATTGTTTTGAGAAACTTAAGAAGCGAGACGGTGGTAAGCTAGTGAAGTCATATTCAGCTAAAACTGACTTGGTGTCATCAGGTAAAAAATGGAACCGTGAATTGAATGCTGCTTCACTTGATATTTTGAGTGCAGCTTCATTGATGGCAGATGGCATTGCAGGTAGCAAAAAATTGCGTGCAGGAAGCTCTCTATTAGGTGGATATGGTAAAGTAAAGACATCAAGGTGTGAGGACTTCACAGAGAAATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCCGCTGATGTATTGGCTGGTATATGTGGTTCTCTATCATCCGAGGCTATGAGTTCCTGCATAACAAGTTCAGTTGATCCTGTAGAAGGTAACAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATGCAAACTGCCCATGACACCTGATGTTACTCAAGATGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATTCTACAGATTGGACTGATGATGAGAAGGCTACTTTTCTTCAGGCTGTATCATCTTTTGGGAAGGATTTTGCTAAGATAGCACGTTGTGTTGGGACAAGATCCCAAGAACAGTGCAAAGTTTTCTTTAGCAAGGGCCGGAAGTGCCTTGGATTAGATCTCATGCGCCCAATACCTGAGAATGTAGGATCCCCAGTGAATGATGATGCAAATGGGGGTGAAAGTGACACCGATGATGCATGCGTTGTTGAGACAGGCTCAATAGTTGGAACTGACAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTTGTATGGCACTAACACGTACCATGATGAGTCCCATCCTGTGGAAGCTAAGAACCCATCAGCTGAATTAAATGAATCAAAGGAAACTAATGGGGCAGAAGTAGATCTTGAACATGCAAATGTTGTTTCTGGTGCTCGTCAAATAAATATTGATTCTAAACAGGGCTGTGATGGTAGTGAAGTTGTCTTGTGTGGTTCTGACAAGTCTTGTTCTGTCGGTGGAGAAGCAGATATACTTATGTCAGATAGAACAGAAGTTGGAAATGAAGCGAATAAATTGGGAGGTGTAGCTACAGAATTGATATCTGCTCCAGATACAAGTGAACCATGCGAGAGCAACTCCGTTGCTGAGGATAGAATGGTGGTTTCTGAGGTTTCTTTTGGCCGTCTTGGAAATGAATTGGAGAGGCATAGAGTGTCTTCACCCCAATTTGTTGATGATAGAGATAATAAACATGAAGCTGATTCAGGTGTTATAGTTGATTTGAAAAGCTCTGTGCATGATTTAAGCCCTATGCTAAATGCTTCACTCTCATCTTTGGGCAATTCTTGTTCAGGATTGAGTTTTAGTACTGAAAGTAAGCATGTGCCCCTTGGAAAGCCTCATGTCTCTGCATTGTCTCTCGAGGATCTTCATGCAACTTCAAACTCGTCGCAAAATACAGTTGTTGATGTTCAATGTGAGAAAACAGCTAGCCAAGATCGACTGTCCTCTACATGTGATATTCAGGGAGGTAGAGATCTGCACTGTCAGAATTCCATTAGCAATGGTGACCATCAGCTCCCTATTACTGTGAATTCATCAGACCATGTTGATGCTGTTAGCATTCTCCAGGGATATCCCTTGCAAGTTCCCGTGAAGAAAGAAATGAATGGCGATATGAATTGCAGCAGTTCAGCAACTGAGCTGCCTCTTCTGCCTCAAAAGATTGAACAGGTTGATGATCATATCAAAACATTCCAGTCGTCAGATTCAGATAAAACATCCAGAAATGGTGATGTGAAACTCTTTGGGAAGATACTGACTAATCCTTCATCCACTCAGAAACCTAATGTGGGTGCTAAAGGGAATGAAGAAAATGAAAATGGTGCCCATCATCCTAAGTTAAGCAGCAGCAAGTCGTCTAGCCTAAAATTTGCTGGTCATCACAGTGCTGATGGTAATTTGAAAATTTTGAAGTTTGACCATAATGATTATGTTGGCCTTGAAAATGTTCCAATGAGGAGTTATGGCTATTGGGATGGGAACAGAATACAGACTGGTCTCTCGACGTTGCCTGATTCTGCTATCTTGCTAGCCAAATATCCTGCTGCGTTCAGTAATTATCCCACATCTGCTGCCAAATTGGAGCAACCGTCAGTGCAGGCGGCATATTCCAAGAATAATGAACGGCTCCTGAATGGTGCATCCACTTTTGCGACTAGGGACATGAATGGCAGCAATGCTGTGATTGATTATCAGATGTTTAGAAGGGATAGTCCGAAAGTGCAGCCATTTATGGTAGACGTCAAGCACTGCCAAGAAGTATTCTCTGAGATGCAGAGAAGAAATGGTTTTGAAGCAATATCAGGTTTACAGCAGCAGAGCATTGGAATGATGGGAATGAATGGTGTTGGGAGACCGGGGATTCTTGTGGGAGGATCGTGCAGTGGGGTCTCAGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGACTGGGAGTATTGCAAGAGAGGATGAATCTTGGGGAGGGAAAGGGGACTGA 5061 0.4294 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAISRSSSDKMLEEDSRPSISRGDGKYGRSGRENRGGPFGQRDWRGHSWEPTNGSMNLPRRQQDVNNDQRSVDDALAYSSHPHSDFGNAWDQHHLKDQHDNKMGGVNGLGTGPRCDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSKSMGGADSHEAKAELQPKSAAANESHSGEAAACGTSSVPSEDTTSRKKPRLNWGEGLAKYEKKKVEVPDASANKDGPVLSTGNTEPCNFLSPSLVDKSPKVAGISECASPATPSSVACSSSPGMDDKLFGKTANVDNDVSNLTGSPAPVSENHLVGFSLNLEKFDMSSLNNLGSSIIELVQSDDPTSLDSGPMRSNSINKLLIWKAEISKVLEMTESEIDLLENELKSLKSDSGETCPCPVALGFQMVGSDEKSCEDHIGVSDQVIRPEPLKIGDDPNMEKMPLSTNLHSIHENGKEEDIDSPGTATSKFVEPLPLIKTVSCDTRGYDNFSRDLDAVQSTAVKFLVPCTTRKESSVPACVDGNTSMEPKNSSMDILYKSIISSNKESAHRASEVFDKLFPQDCFKIEKMEASSDKCTHTFIMEKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSVRKCRPKSHKKNELSVRSSCNGNQKNRSSIRSRFPFPAGNQLSLVPTSEIINFTSKLLSESQVKVQRNSLKMPALILDEKEKITSKFVSCNGLVEDPLATEKERSMINPWTPKEREVFLEKFATFGKDFRKISSFLDHKTTADCVEFYYKNHKSDCFEKLKKRDGGKLVKSYSAKTDLVSSGKKWNRELNAASLDILSAASLMADGIAGSKKLRAGSSLLGGYGKVKTSRCEDFTEKSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGNRDRKFLKVNPLCKLPMTPDVTQDDDETCSDESCGEMDSTDWTDDEKATFLQAVSSFGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSIVGTDKSGTKTDEDLPLYGTNTYHDESHPVEAKNPSAELNESKETNGAEVDLEHANVVSGARQINIDSKQGCDGSEVVLCGSDKSCSVGGEADILMSDRTEVGNEANKLGGVATELISAPDTSEPCESNSVAEDRMVVSEVSFGRLGNELERHRVSSPQFVDDRDNKHEADSGVIVDLKSSVHDLSPMLNASLSSLGNSCSGLSFSTESKHVPLGKPHVSALSLEDLHATSNSSQNTVVDVQCEKTASQDRLSSTCDIQGGRDLHCQNSISNGDHQLPITVNSSDHVDAVSILQGYPLQVPVKKEMNGDMNCSSSATELPLLPQKIEQVDDHIKTFQSSDSDKTSRNGDVKLFGKILTNPSSTQKPNVGAKGNEENENGAHHPKLSSSKSSSLKFAGHHSADGNLKILKFDHNDYVGLENVPMRSYGYWDGNRIQTGLSTLPDSAILLAKYPAAFSNYPTSAAKLEQPSVQAAYSKNNERLLNGASTFATRDMNGSNAVIDYQMFRRDSPKVQPFMVDVKHCQEVFSEMQRRNGFEAISGLQQQSIGMMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQTGSIAREDESWGGKGD 1686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2475 1686 MobiDBLite consensus disorder prediction 78 110 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 200 223 - -
Aed1g2475 1686 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 157 171 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 1103 1122 - -
Aed1g2475 1686 Pfam Myb-like DNA-binding domain 999 1038 IPR001005 -
Aed1g2475 1686 SMART sant 996 1044 IPR001005 -
Aed1g2475 1686 SMART sant 782 830 IPR001005 -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 691 707 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 1 272 - -
Aed1g2475 1686 ProSiteProfiles SANT domain profile. 997 1038 IPR017884 -
Aed1g2475 1686 Gene3D - 762 834 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 1667 1686 - -
Aed1g2475 1686 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1662 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 1438 1453 - -
Aed1g2475 1686 Gene3D - 973 1051 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 8 45 - -
Aed1g2475 1686 SUPERFAMILY Homeodomain-like 997 1046 IPR009057 -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 118 144 - -
Aed1g2475 1686 SUPERFAMILY Homeodomain-like 769 829 IPR009057 -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 686 707 - -
Aed1g2475 1686 Coils Coil 423 450 - -
Aed1g2475 1686 MobiDBLite consensus disorder prediction 1437 1477 - -
Aed1g2475 1686 CDD SANT 1000 1038 IPR001005 -
Aed1g2475 1686 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2475 Aed-Chr1 20474655 20485362 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed1g2475 Myb_DNA-binding 8.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2475 - - gmx:100810588 2958.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2475 1 20474655 20485362 Aed1g2475 1 20474655 20485362 ECH