Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2467 ATGGGGAGGAAAGGGGGTTGGTTTTCTGCAGTGAAGAGAGTTTTTGTTTCTGAAAAAAAGGAACAGAAACATCATCAACATCATCATAGTAAGTCAAAGTTAGGATGTTTTGGGGCTCATCAGTTTGAGGATATAGAAGGGGCACCAATTGCCATTATTCCCTCACTTCCACCTAGAGAAGACATCAAACCAATAAGTAGCGAGGCAGGGAATAATGGACAGAGCAAACAAGCCTTTTCTTTGGTTTTGGCCACTGCTGTGGCTGCGGGTGCTGCTGTTGCGGGTGCTGCAGACATTGCTCGTGTCACAAACACGCCTCGTTCCAATAGAAAACTGAATCTAGATATGGCAGCTACCAAGATTCAATCAGTGTACCGTGGATATTTGGCAAGAAAATACATGCGTGGATTGAGAGGTTTGGCGAGGTTGAAAACATTGGTGCAAGGGCAATCTGTTCAAAGGCAAGCGGCTACTACCTTACAATGTATGCAAACTCTTTCAAGGTTGCAGTCTCAGGTTCGTGCGAGGAAGGTCAGAATGTCTGAGGAGAACCAAACTCTTCAAAGACAAATGCAGAGGAAACGTGAAAAGGAATTTGAGAAGTGGCAAGCTAATCAGCAGAATGGAGAGAAGTGGGACGATAGCTCAAAATCAAAGGAACAAGTTGATGCAAAAAATTTGAACAGACAAATAGCCGCTATGAGAAGAGAGAAGGCTATGGCCTATGCATCAACACATCAGCAAACGTGGAGGAACAATCCAAAATCTGCTACAAATGCGACATTTATGGATCCAAACAATCCACACTGGGGGTGGAATTGGCTAGAGAGATGGATGGCAGCAAGGCCATGGGAGGGTCAAAACACTACATACCACATTGGCCATGCATCTGCCAAGAGTGTTGCAAGCCAAACCATGTCAGTTGGTGAAATCACAAAATTGTATTCCCTCCGTGATCAGAACAATGATATGAATATCAACAGCTCCCCACAAAACCAAAAACCAACGCGTCCAACAACAACCTCAAAGGCCCCATTAGCCAATGGAACAAAGGCAAAGGTACCAAGTCCAAGGACCGGTTCATGGGGTGGCGATGGCGACTCCAAAAGCTTGTTCATCCAAGCCAAAGAAAACAACCGCAGGCACAGCATTGGAGTGTCTCCAGTGGGAGATGATGAGAGCCATTCAAGCTCATCACCGACCACAAAGGTTGCAAAAAAAGGCAAGACATCATCATCATCCAGTGTGAGAAGTGCATCAGTTGGTGTACATAGAAATGGAACACCTGAAAAATCAGCTTCAGCTTCAGCTTCTGCTCCTCTAAAGAAGAGGCTTTCTTTCCCTGCTTCTCCAGCAGCAGGTACAAGAAGGCCAGGAAATGTAGCTTCCAATAAGACTGTTGCTAAAAGATGA 1413 0.4522 MGRKGGWFSAVKRVFVSEKKEQKHHQHHHSKSKLGCFGAHQFEDIEGAPIAIIPSLPPREDIKPISSEAGNNGQSKQAFSLVLATAVAAGAAVAGAADIARVTNTPRSNRKLNLDMAATKIQSVYRGYLARKYMRGLRGLARLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQTLQRQMQRKREKEFEKWQANQQNGEKWDDSSKSKEQVDAKNLNRQIAAMRREKAMAYASTHQQTWRNNPKSATNATFMDPNNPHWGWNWLERWMAARPWEGQNTTYHIGHASAKSVASQTMSVGEITKLYSLRDQNNDMNINSSPQNQKPTRPTTTSKAPLANGTKAKVPSPRTGSWGGDGDSKSLFIQAKENNRRHSIGVSPVGDDESHSSSSPTTKVAKKGKTSSSSSVRSASVGVHRNGTPEKSASASASAPLKKRLSFPASPAAGTRRPGNVASNKTVAKR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2467 470 MobiDBLite consensus disorder prediction 174 223 - -
Aed1g2467 470 Gene3D - 113 163 - -
Aed1g2467 470 Coils Coil 217 244 - -
Aed1g2467 470 PANTHER IQ-DOMAIN 5-RELATED 1 468 - -
Aed1g2467 470 SMART iq_5 113 135 IPR000048 GO:0005515
Aed1g2467 470 MobiDBLite consensus disorder prediction 383 470 - -
Aed1g2467 470 MobiDBLite consensus disorder prediction 319 347 - -
Aed1g2467 470 MobiDBLite consensus disorder prediction 175 204 - -
Aed1g2467 470 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Aed1g2467 470 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 468 - -
Aed1g2467 470 MobiDBLite consensus disorder prediction 390 435 - -
Aed1g2467 470 Coils Coil 177 197 - -
Aed1g2467 470 MobiDBLite consensus disorder prediction 319 369 - -
Aed1g2467 470 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2467 Aed-Chr1 20432220 20435367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2467 1 452 IQD Protein Family AT5G03040 37.076 4.77e-82 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2467 - - gmx:100807307 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2467 1 20432220 20435367 Aed1g2467 1 20432220 20435367 ECH