Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2464 ATGGAGTACAAAGTGAAAACCGCAACAACATCAACACCTTCTCCACCAATCCCAATCCATGTTCCCACTATGCTCTCAAACTCTCACTCTCCTCCATCTTCATCTTCTTCACCTCCCTCACAATCTCACACACCTTTCCCTTCACCCTCTCAGGGCTCTCCCTCTGCTGCTCCACCGTCACCGTCTCCGCCGCCACCACCACCCGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATACTCCGCCGTAGGTGTGTGGAGAAGTGTGTGTTGGCTCCATATTTTCCTCCCACTGATCCACTCAAGTTCACCATTGCTCACAGAGTCTTTGGAGCAAGCAACATCATCAAGTTCTTGCAGTTTTTCGCAAGGTTAAAGATTGAATTTTGTGACGAAACTCCGATGGAGCTGCCAGAATCTCAGAGAGCAGATGCAGTGAGCAGCATGGTTTATGAGGCAAATGCTAGGATCAGAGACCCAGTTTATGGGTGCGCAGGTGCAATATGCCAACTTCAAAAGCAAGTTAGTGAGCTACAAGCACAACTGGCCAAAACACAAGCTGAGCTAGTGAACATGCAGTGCCAACAAACCAATTTAGTGGCTCTAATTTGCATGGAAATGAGTCAATCACAGGAGCAGCACATGCTTCAGCCTCAACCTCACGTTGATATGAGCTGCTTCATAGAGGACAACAGTTTTGGGACTGCTTGGGAGCCTCTTTGGACATGA 726 0.489 MEYKVKTATTSTPSPPIPIHVPTMLSNSHSPPSSSSSPPSQSHTPFPSPSQGSPSAAPPSPSPPPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQFFARLKIEFCDETPMELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKTQAELVNMQCQQTNLVALICMEMSQSQEQHMLQPQPHVDMSCFIEDNSFGTAWEPLWT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2464 241 Coils Coil 167 194 - -
Aed1g2464 241 MobiDBLite consensus disorder prediction 21 50 - -
Aed1g2464 241 ProSiteProfiles LOB domain profile. 72 188 IPR004883 -
Aed1g2464 241 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 60 229 - -
Aed1g2464 241 Pfam Lateral organ boundaries (LOB) domain 73 185 IPR004883 -
Aed1g2464 241 MobiDBLite consensus disorder prediction 51 65 - -
Aed1g2464 241 MobiDBLite consensus disorder prediction 1 65 - -
Aed1g2464 241 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 60 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2464 Aed-Chr1 20410848 20412286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2464 69 241 AS2 family AT1G07900 65.730 2.16e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed1g2464 LOB 8.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2464 - - gmx:100806667 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2464 1 20410848 20412286 Aed1g2464 1 20410848 20412286 ECH