Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2441 ATGAGTGTGACAACCTCTCCCAAAGAAGAGGATATCGATGATGAGGCTTGCCTTGATGCTATGTTACTGTGCACTAGTCAAGTGTTTCCTTCAGTACTGAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCAAAGGCAAGTACTGATGCAACTATGTCAGCATCAGAAATTGCTTCTATACTGCCAAAACCAAAACAACACCCAGACTTACCCAAGAGGCTCGACCGCATGCTGCGTTTACTTGCCAGCTATTCTCTTCTCACTTGTTCCTCTCACACCAATGAAGATGGTACCACGACTGAGACAACTTATGGACTCTCATCTGTTGGAAAATACTTTGCCACTGATGAAACTAGGGGCTGTGCGGATTCCATCACAACATTGCTCCACCATCCTACACTTTACCAACTTTGGCCAAACTTTAAGGATGTAATTGTTGATGCCGAGGACGACCTATGCAAGAAGGTTCATGGAATGTCTTATTTCCAATGCACTGAAAGAGATCCAAAACTGAATTACATTTTCAACAAATCAATGGCCAATCTTAGCACCATAAAAATGAATAGGATTCTTCAAGTGTATAAAGGGTTTGAAGGATTAAGTACCCTGGTTGATGTGGGAGGAAGTACTGGGAAAAATCTTCTCATGATAATCTCCATGTACCCTACAATTAAGGGTATCAATTTTGATTTGCCCCAAGTTGTTGAAAAGGCTCCAGCTTATCCAGGAATACAATATGTTGGAGGAGACATGTACAATTATGTACCACAGGGTGATGCCATAATCCTAAAGGCTGTGTTGCACAATTGGTCAGATGAACAATGCTTAATCATTTTGAGGAACTGTCACAATGCACTGCCACAAAATGGAAAGGTGATTGTGATAGAGTTTATAGTGCCAGAAACATCAGAGTCAAATGTATCAAAGCTTGTTTCCACCCTTGACAACCTCATGTACATCACAAGTGGTGGGAAGGAAAGAACTGAAAAGGAGTACGAGGCATTGTGCAAGCTTTCTGGATTTTCAAGGTTCCAAGTTGCATGCCGTGCGTTCTCTGCATTAGGACTCATCGAGTTCCACAAATAA 1092 0.4167 MSVTTSPKEEDIDDEACLDAMLLCTSQVFPSVLNAAIELNLFEIIAKASTDATMSASEIASILPKPKQHPDLPKRLDRMLRLLASYSLLTCSSHTNEDGTTTETTYGLSSVGKYFATDETRGCADSITTLLHHPTLYQLWPNFKDVIVDAEDDLCKKVHGMSYFQCTERDPKLNYIFNKSMANLSTIKMNRILQVYKGFEGLSTLVDVGGSTGKNLLMIISMYPTIKGINFDLPQVVEKAPAYPGIQYVGGDMYNYVPQGDAIILKAVLHNWSDEQCLIILRNCHNALPQNGKVIVIEFIVPETSESNVSKLVSTLDNLMYITSGGKERTEKEYEALCKLSGFSRFQVACRAFSALGLIEFHK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2441 363 Pfam O-methyltransferase domain 140 344 IPR001077 GO:0008171
Aed1g2441 363 Gene3D Vaccinia Virus protein VP39 117 363 IPR029063 -
Aed1g2441 363 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 363 - -
Aed1g2441 363 SUPERFAMILY "Winged helix" DNA-binding domain 14 119 IPR036390 -
Aed1g2441 363 PANTHER O-METHYLTRANSFERASE 6 363 IPR016461 GO:0008168
Aed1g2441 363 CDD AdoMet_MTases 204 301 - -
Aed1g2441 363 Gene3D - 2 115 IPR036388 -
Aed1g2441 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Aed1g2441 363 Pfam Dimerisation domain 32 84 IPR012967 GO:0046983
Aed1g2441 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 353 IPR029063 -
Aed1g2441 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2441 Aed-Chr1 20272573 20274291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2441 13 363 Monolignol Biosynthesis Gene Families AT5G54160 49.008 2.45e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2441 - - gmx:100798347 454.907