Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2439 ATGGAGAGTCTCAAGTTCGCATCTTTGACGCTGTCTCCTCTCTCTCGACGCTCCGGGATGCTAGGGAAGCGGTTGAATTCTCCTTTACTTACTATTGATTCTGCACCACAGTTTTGCTATTGCAAGGCTGATCTTGCTACTTCATCATCAAGTATTCCACTGCCAAACACCAGTTTGTCTTGTAGATTTTCACCAAGTGTAGCAACAGCAACATGGACATCAAATCTTTCTACCAAACATTGGATATTGCACTCAACTGCACAGATAGAAAATATAATCACGAGCAGTGAAGACCAAAGTATGTGGGAAGCATGTAAACAAGCCCTTTCTGCATTTAACTTTAGTGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGTCTTGTTCATTCCCCTTATTGGGGAGAAGAACGTAATATGGAAGTTCCGAAATCCGAGACAGTAAATGGAGTATTAGACTATCTAAGGAGTTTAAATCTTTCTGATGATGATCTGTCCAAGTTGCTTAAAAAGTTTCCAGAAGTTCTTGGATGTAAGTTAGAAGAAGAGTTGAAAGGCAATGTAAAGATCCTGGAGGAGCAGTGGAGTATTAAGGGAAATTCTCTTAGGAAACTTCTACTTAGAAATCCAAAAGTTTTGGGTTATAATGTTGATTGTAAGGGAGACTGCATGGCACAGTGCACTAGATGCTGGGCTCGCTTCTAG 708 0.404 MESLKFASLTLSPLSRRSGMLGKRLNSPLLTIDSAPQFCYCKADLATSSSSIPLPNTSLSCRFSPSVATATWTSNLSTKHWILHSTAQIENIITSSEDQSMWEACKQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERNMEVPKSETVNGVLDYLRSLNLSDDDLSKLLKKFPEVLGCKLEEELKGNVKILEEQWSIKGNSLRKLLLRNPKVLGYNVDCKGDCMAQCTRCWARF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2439 235 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 234 - -
Aed1g2439 235 PANTHER CGI-12 PROTEIN-RELATED 18 234 IPR003690 GO:0003690|GO:0006355
Aed1g2439 235 Pfam mTERF 153 217 IPR003690 GO:0003690|GO:0006355
Aed1g2439 235 Gene3D Transcription termination factor 3, mitochondrial 76 231 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed1g2439 mTERF 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2439 - - gmx:100797265 408.683