Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2432 ATGTCTAAGGATAGTGGTGGCACTGCATCAAAGTGGTGCAAAAGCGTGTTGCCGCACAAGACCCCGAACGTGAGGGACGAGTACGTTATCGGGAACAAGGTACTGGGGAAGGGGAACTCGGCGACCACATACGTGTGCACAAACAAAGTAACAGGGAAGGTTTACGCTTGCAAAACGATCCCAAAGACGAAGCTGTTGAGCAAAGAAGATTACGACGAGGTGTGGAGGGAGATTCAGGTGACGCACCATTTGTCGGAGCACCCGAACGTGGCTCGGATACAGGGAAGCTACGAGGACAAATTCGCGGTGCACATTGTGATGGAGATGTGCCGCGGTGGCGAGCTCTTCTATAGGATCACTCAGAGAGGACATTACAGCGAGAAACAGGCTGCAAAGTTGATGAAGACCATTGTTGGGGTGGTCGAGGCGTGCCACTCCCTTGGTGTCATCCATAGGGATCTCAAGCCTGAGAATTTCTTGTTCGATAGCCATGCTTATAATGCCACCTTGAAGGTCATCGATTTCGGCTTCTCTGTCTTCTACAAGCCAGGACAAACGTTTAGTGATATAGTGGGAACATGCTACTATATGGCCCCTGAAGTGTTACGCAAGCAATCTGGGCCAGAAGTGGACGTTTGGAGTGCTGGTGTTATCCTATACATCTTACTGAGAGGCATCCCACCTTTCTGGGCAAAAACCGAATCAGCAATTTTCCAAGAGATCTTACATGGAGAGATTGATTTTTTCTCCGATCCGTGGCCAAGTATATCAGCAAGTGCTAAGGATTTGATCAAACAAATGTTGGATAAGGACCCTAAAAAAAGGATTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTGTTGATGATAGCGTTGCTCCTGACAAACCTCTGGACCCTGCTGTTTTGACACGCCTAAAGCATTTCTCAACAATGAATAAACTTCAGAAGATGGCATTACGTATCATAGCAGAAAGACTTTCAGAGGAAGAAATAGGTGGATTAAAAGAGTTATTTAAAATGATCGACGAAGACAATAGTGGGACAATCACTTTTGAGGAACTCAAAGAAAGTTTGAAAAGTGTGGGATGTGATCTCATGGAATCTGAAATTAAATCTCTTATGGAGGCGGCTGACATAGACAACAGTGGATCAATAGACTATGGTGAATTTCTGGCTGCTACACTACACTTGAATAAGATGGAAAAAGAAGATAATTTGGTAGCTGCTTTTGCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGAAGAGATTCAACAGGCTTGTAAAGATTTTGGCCTTGGTCACATGCATCTGGATGAGATAATCAAAGAGATTGATCAAGACAACGACGGGAGAATTAACTATGCGGAGTTTGTAGCAATGATGAGAAAGAGTGGTCCAGACGTTGGTAGGAGTAGAAAAGGCAATTTTAAAAGTTCATTATTGGATATGTTCGACTCATCTTGA 1476 0.4411 MSKDSGGTASKWCKSVLPHKTPNVRDEYVIGNKVLGKGNSATTYVCTNKVTGKVYACKTIPKTKLLSKEDYDEVWREIQVTHHLSEHPNVARIQGSYEDKFAVHIVMEMCRGGELFYRITQRGHYSEKQAAKLMKTIVGVVEACHSLGVIHRDLKPENFLFDSHAYNATLKVIDFGFSVFYKPGQTFSDIVGTCYYMAPEVLRKQSGPEVDVWSAGVILYILLRGIPPFWAKTESAIFQEILHGEIDFFSDPWPSISASAKDLIKQMLDKDPKKRISAHEVLCHPWIVDDSVAPDKPLDPAVLTRLKHFSTMNKLQKMALRIIAERLSEEEIGGLKELFKMIDEDNSGTITFEELKESLKSVGCDLMESEIKSLMEAADIDNSGSIDYGEFLAATLHLNKMEKEDNLVAAFAYFDKDGSGYITIEEIQQACKDFGLGHMHLDEIIKEIDQDNDGRINYAEFVAMMRKSGPDVGRSRKGNFKSSLLDMFDSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2432 491 SUPERFAMILY EF-hand 326 466 IPR011992 -
Aed1g2432 491 Pfam EF-hand domain pair 335 395 IPR002048 GO:0005509
Aed1g2432 491 Pfam EF-hand domain pair 407 466 IPR002048 GO:0005509
Aed1g2432 491 ProSitePatterns EF-hand calcium-binding domain. 343 355 IPR018247 -
Aed1g2432 491 CDD EFh 335 394 IPR002048 GO:0005509
Aed1g2432 491 ProSiteProfiles EF-hand calcium-binding domain profile. 330 365 IPR002048 GO:0005509
Aed1g2432 491 Gene3D - 295 468 - -
Aed1g2432 491 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2432 491 PANTHER BNAA09G05220D PROTEIN 13 476 - -
Aed1g2432 491 Pfam Protein kinase domain 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2432 491 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Aed1g2432 491 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Aed1g2432 491 SMART efh_1 334 362 IPR002048 GO:0005509
Aed1g2432 491 SMART efh_1 370 398 IPR002048 GO:0005509
Aed1g2432 491 SMART efh_1 406 434 IPR002048 GO:0005509
Aed1g2432 491 SMART efh_1 440 468 IPR002048 GO:0005509
Aed1g2432 491 SMART serkin_6 28 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2432 491 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Aed1g2432 491 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Aed1g2432 491 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Aed1g2432 491 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Aed1g2432 491 SUPERFAMILY Protein kinase-like (PK-like) 16 314 IPR011009 -
Aed1g2432 491 ProSiteProfiles EF-hand calcium-binding domain profile. 440 471 IPR002048 GO:0005509
Aed1g2432 491 CDD STKc_CAMK 28 286 - -
Aed1g2432 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Aed1g2432 491 Gene3D Phosphorylase Kinase; domain 1 30 114 - -
Aed1g2432 491 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 476 - -
Aed1g2432 491 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2432 Aed-Chr1 20219263 20221731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2432 15 488 EF-hand Containing Proteins AT1G35670 71.008 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed1g2432 Pkinase 3.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2432 K13412 - gmx:100811596 888.256