Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2422 ATGGAGCCTCTCTCTTCTACTAAACACCACAACAACAATCTCGGCAAGCCTACCTCCCTCCACATGGAGGCTCCGGCGCCGGAGCCCAGCCCTCTTCGGAAGATCATCGTCGTCACCTCCATCGCTGCCGGGGTGCAATTCGGCTGGGCCCTACAGCTCTCCCTTCTCACCCCCTACGTCCAGCTTCTCGGCATCCCTCACACCTGGGCCGCCTTCATCTGGCTCTGCGGCCCAATCTCCGGCATGCTCGTCCAGCCCATCGTCGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGTCGCCGTCCCTTCATCGCCGCAGGAGCACTCGCCGTCGCCATCGCCGTCTTCCTCATCGGCTACGCCGCCGACCTCGGCCACATGTTCGGCGACAACCTCGATAAAAAAACTCGCCCCCGCGCTATCGCCATCTTCGTGGTGGGCTTCTGGATCCTGGACGTGGCCAACAACATGCTCCAAGGCCCCTGCCGCGCTCTCCTCGCCGACCTCTCCGCCGGCAACCAACGCAAAACTCGAAACGCCAACGCCTTCTTCTCCTTCTTCATGGCCGTCGGAAACGTCCTTGGCTACTCCGCCGGCGCCTACAGCGGCCTCCACAACGTGTTCCCCTTCACCAAAACAAAAGCCTGCGACGTCTACTGCGCAAACCTAAAAAGCTGCTTCTTCCTCTCCATCGCGCTTCTCCTCACGCTCACCACCATTGCCTTGATTTACGTGAAGGAGGAAACGGTGTCGTCGGAGAAGATCAGAAGCGCGAACGCGGTCGAGGAGGACGGGTCCCACGGGGGCATGCCGTGCTTCGGGCAGTTATTCGGTGCATTTCGGGAACTGAAGCGTCCCATGTGGATCCTTCTGCTGGTGACGTGTCTCAATTGGATTGCGTGGTTCCCGTTTTTGCTATTCGACACCGACTGGATGGGGCGTGAGGTGTACGGTGGAACCGTCGGGGAAGGGAAGGCGTACGATAGAGGCGTCCACGTGGGTGCCTTGGGGCTCATGCTCAACTCAGTTGTGCTCGGTGCGACGTCGTTGGGAGTGGATGTGCTGGCGCGTGGAGTTGGCGGCGTCAAGAGGCTCTGGGGGATTGTTAACTTCTTGCTCGCAATTTGTTTGGCCATGACGGTTTTGATTACCAAGATGGCCCAACATTCTCGCCAGTACACCGTCCTCCCAAACGGCCACCAGGAACCGCTGCCGCCTCCCACCAGCGTCAAGGCCGGCGCGTTGGCTCTCTTCTCCGTTCTCGGAATCCCACTCGCGATTACTTACAGCATACCCTTTGCTCTAGCATCCATATTCTCCAGCACCTCAGGGGCAGGCCAGGGATTATCTCTGGGAGTGCTCAATCTTGCAATTGTCATACCTCAGATGGTGGTGTCTGTGATAAGTGGACCATGGGATGCTCTATTTGGAGGTGGTAACTTGCCAGCATTCGTGGTTGGTGCGGTGGCGGCGGCCGCCAGTGGCATTTTATCCATAATACTGCTGCCATCCCCACCACCGGATTTGGCCAAAGCTGCAACCGCAGCCGGAGGAGGGTTCCATTAA 1572 0.5929 MEPLSSTKHHNNNLGKPTSLHMEAPAPEPSPLRKIIVVTSIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHMFGDNLDKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGNQRKTRNANAFFSFFMAVGNVLGYSAGAYSGLHNVFPFTKTKACDVYCANLKSCFFLSIALLLTLTTIALIYVKEETVSSEKIRSANAVEEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDRGVHVGALGLMLNSVVLGATSLGVDVLARGVGGVKRLWGIVNFLLAICLAMTVLITKMAQHSRQYTVLPNGHQEPLPPPTSVKAGALALFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVISGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2422 523 PANTHER SUGAR TRANSPORTER 24 514 - -
Aed1g2422 523 Pfam MFS/sugar transport protein 48 302 - -
Aed1g2422 523 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 24 514 - -
Aed1g2422 523 MobiDBLite consensus disorder prediction 1 23 - -
Aed1g2422 523 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 509 IPR005989 GO:0005887|GO:0008515|GO:0015770
Aed1g2422 523 MobiDBLite consensus disorder prediction 1 18 - -
Aed1g2422 523 Gene3D MFS general substrate transporter like domains 29 516 IPR036259 -
Aed1g2422 523 CDD MFS_SLC45_SUC 35 483 - -
Aed1g2422 523 SUPERFAMILY MFS general substrate transporter 33 508 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2422 Aed-Chr1 20126104 20129598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2422 28 523 Sucrose Transporter Gene Family AT1G22710 69.583 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2422 K15378 - gmx:547679 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0814 7 6223436 6226911 Aed1g2422 1 20126104 20129598 PCT