Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2406 ATGATGGAGCTTCACATCTTTCTTTTACTCGTCACACTATTCTTGATCACAATCCGGTTCATTCTGAACCGCCACGTTAGAAAAAACCAACCCCCCGGTCCAACCGGGCTCCCCATAATCGGAACCCTCCACCAACTGGGCCCCAAGCCCCACTGCTCCCTCTCCTCCCTCGCCCAAACCTACGGCCCAATTATGTCCCTCCGCCTGGGCTCGGTCACCGTAGCCGTAGCCTCGTCCCCCGGCGCGGCCCAAGAAATTCTCCAAAAGAACGACCAAGCCTTCGCAAACAGGCCCATCCCGGAATCCGTGGCCGCCCAGCCCAACGTGGGCGACACCCTGGCCTGGGCCCCCGCGGACACACGGTGGCGCAACCGGCGCCGCGTCTGCACCACGCAAATCTTTACCACCCAACGCCTCGACCAGCTGCAACACCTCCGGCACCGGAAAGTGCAGCAACTCGTTCAGCACCTTCACAAGCAAGCTTCGAATAAAAAAGGCGTTGACATCGGGGAAGTGGCGTTCGCGACGATGCTGAACCTGGTTTCGAACACGGTGTTCTCGGAGGACCTTGTGGACCCGGAGTTCGAGAACGCGGGGGAGTTCAAGGAGCTTGTGTGGAGGATCATGGAGGACGCCGGGAAGGTTAACATCTCCGACTACTTTCCATTGCTCAAGCGGTTCGACCTGCAGGGCGTGAAGCGACACGTGGCGGTTTCTTATGCGAGGTTGCATGAAATCTTTGATGACATGATTCGGAAACGTGTTGCGGAGAGAGAAGGGTCGCGTGGCTCAAAGGGGGACTTCTTAGACGTGTTGCTTGATCATTGTCAACAACCGGAGGCCTCCGATTTTACCGTGGAAAGCATCAAGCCATTAATTCTGGATTTGTTCATCGCCGGAAGTGACACTTCTGGATCAACATTAGAATGGGCAATGGCAGAGCTTCTACGAAACCCAGAAGTTATGCAGAAAGCAAGAAAAGAAATGAGGCAAGTGGTAGGTACATCCAAAGAAGTAAAAGAATCAGACATTCCTAGACTTCCCTACATCCAAGCAATAGTGAAGGAAACACTTCGACTTCACCCAGCAGTGCCCCTTCTCTTACCTTACGTTGCAGCACACGATGTTGTTATAAGTGGCTACACCATTCACAAAGGGAACCAAGTCCTCATCAACGCATGGTCTATTGGGAGGAACCCCCAGTTATGGGATAACCCTTTGTTATTTCAGCCAGAAAGGTTTGTTATTGCAGGGTCCAACAACAAAGGAAGGGATTTTGAGTATTTACCTTTTGGTGCTGGTAGGAGAATTTGCCCTGGTTTGCCACTTGCCAATAGGATGATTACTTTGATGTTGGCTACGTTTGTGCACTCTTTTGAGTGGGAGCTTCCTCATGGCCTCACTCCTCAAACGCTTGACATGACTGAGCAGTATGGAATCACGTTGAAGAGGCTTTCTCCTCTTTGTGCTATTCCCCAAAATGCATAG 1488 0.5215 MMELHIFLLLVTLFLITIRFILNRHVRKNQPPGPTGLPIIGTLHQLGPKPHCSLSSLAQTYGPIMSLRLGSVTVAVASSPGAAQEILQKNDQAFANRPIPESVAAQPNVGDTLAWAPADTRWRNRRRVCTTQIFTTQRLDQLQHLRHRKVQQLVQHLHKQASNKKGVDIGEVAFATMLNLVSNTVFSEDLVDPEFENAGEFKELVWRIMEDAGKVNISDYFPLLKRFDLQGVKRHVAVSYARLHEIFDDMIRKRVAEREGSRGSKGDFLDVLLDHCQQPEASDFTVESIKPLILDLFIAGSDTSGSTLEWAMAELLRNPEVMQKARKEMRQVVGTSKEVKESDIPRLPYIQAIVKETLRLHPAVPLLLPYVAAHDVVISGYTIHKGNQVLINAWSIGRNPQLWDNPLLFQPERFVIAGSNNKGRDFEYLPFGAGRRICPGLPLANRMITLMLATFVHSFEWELPHGLTPQTLDMTEQYGITLKRLSPLCAIPQNA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2406 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 Pfam Cytochrome P450 31 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 4 493 - -
Aed1g2406 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Aed1g2406 495 SUPERFAMILY Cytochrome P450 24 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 4 493 - -
Aed1g2406 495 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2406 495 Gene3D Cytochrome P450 22 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2406 Aed-Chr1 20011478 20015753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2406 6 492 Cytochrome P450 AT2G45550 44.534 4.17e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2406 - - vra:106769993 809.29