Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2402 ATGTTCACACCCAATAGTGATAGTCCAATCCCGTACACCAAAACTCACATCAAAACCCTAGGTACGACCTTTATTCCATTAACCCGAAGCCCTAATCACCGTTCATCATCCCCTGATCGAAACTTGAACTCCACGCACTCACATCACGACTATTATGCACTTTACAAGGTTTACAAGAAAAGTGGAGCTGGTCCTAAAAATGGTGAACAATATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGATGAAATAGTAGATTTTAATATTAAAAAAGCTGATCGGGAGGCTCCAAATGATGTTGCTGTGAATGATAATGTACTCCAGCCTTTGCTTGATGATGAAATCGACAACATCATTAGAGGAATTTTGGATGATGAGCTTGTCCTTGATCAACAGCCTGTGAATGGTTATCCTGACTTTCCTCAGGTTGTTACTGAAGAAGCACAAAGTATTGTTGTGGATCAGTTTACTGAGGCTGTGATGTTCCCTGAGCCAATCAGAAACATTCATCCTAACAGCCAATTTTTTGATGCACAGCCTAGCCTCGACTTCAATCAGACAGTTACTTCTCAGTTGCAAGTTTCTGAAGTATCTGAGGTCTCTTCTGCTTTCAACATTAAAACAAAGGAGCTTGACTTTAATGAGGATGGTTTCTTGGAAATTAATGATCTCATTGATACTGAACCTACATTGTCAAATGTGGAAAATCCTATGGAGTACCAGCAGTTTGAAGATGGGTTAAGTGAACTTGATCTGTTCCAAGATGCACAGATGTTTCTTCGTGACTTGGGGCCAATTCTTCACGAAACAGATTCACATGCATATACGAATGCCCTTATCAGCAGCAACATTGAAAGTCAAAGTTACCAGTTGCTGCAAAATCCAGAGGATGCCAATCAAACTGTTGGTGAATTCTGGATGCATGGTGAAACAAACATCCCAAGTCCATCAGAAGGCCTTGTTGATTCTTTCTCGCTATCATCCCCAGGTGTTGTATATGATTCTGTTGGCTTTCCTACGGAAGGCATTAACAATCAAAGTAGCACTGTTGAAGATGTTGCTACAAGTAGCTTCTCCTCTGCTCTCTGGGCCTTTGTTGAGTCAATACCTACTACTCCTGCATCAGCTGCTGAAAGTGCTTTGGTGAACCGAGCTTTGAATCGAATGTCTAGCTTCAGCAGGTTGAAGATCAAGCACACAAACATTGCTGCAGCAGGTAACGACACTGCAACTATGAAGAGAGCAGGCAGAAAGGGATTTCCATTCCTTTTCTTCCCTATTCTTATTGCTTTATGTGCTTTTTGTTGGGTTTTTGTTGGAAACTTAAGACTATTAGGGAGATGTATCTCTCCTTGA 1359 0.4128 MFTPNSDSPIPYTKTHIKTLGTTFIPLTRSPNHRSSSPDRNLNSTHSHHDYYALYKVYKKSGAGPKNGEQYGAPFNEEEWADDEIVDFNIKKADREAPNDVAVNDNVLQPLLDDEIDNIIRGILDDELVLDQQPVNGYPDFPQVVTEEAQSIVVDQFTEAVMFPEPIRNIHPNSQFFDAQPSLDFNQTVTSQLQVSEVSEVSSAFNIKTKELDFNEDGFLEINDLIDTEPTLSNVENPMEYQQFEDGLSELDLFQDAQMFLRDLGPILHETDSHAYTNALISSNIESQSYQLLQNPEDANQTVGEFWMHGETNIPSPSEGLVDSFSLSSPGVVYDSVGFPTEGINNQSSTVEDVATSSFSSALWAFVESIPTTPASAAESALVNRALNRMSSFSRLKIKHTNIAAAGNDTATMKRAGRKGFPFLFFPILIALCAFCWVFVGNLRLLGRCISP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2402 452 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 41 451 - -
Aed1g2402 452 MobiDBLite consensus disorder prediction 26 42 - -
Aed1g2402 452 PANTHER NAC TRANSCRIPTION FACTORS 2 41 451 - -
Aed1g2402 452 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2402 Aed-Chr1 19985554 19991702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2402 7 450 NAC Transcription Factor Family AT1G34190 32.083 2.71e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2402 - - gmx:100794925 699.893