Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2398 ATGGCGTATAGAACTTCAAGCATCACAAGTTTGTTTGTGACAGTACTGGTGTTGTTGGGCACAACATGCGATGCACAATTGTCTTCTACGTTTTATGACAGTGCATGCCCCAATGCACTTAGCACCATAAGATCTGTGATTCGTAGCGCAGTTTCTGCTGAGCGCCGCATGGCTGCGTCTCTCATTCGACTTCATTTCCATGACTGCTTTGTTCAGGTGGGTGGTCCATCATGGACTGTGAAGCTTGGACGAAGAGATTCAACCACCGCAAGCAAAAGTTTGGCTACTAGTGACCTTCCACGATTTACTGATGATCTTAACACTCTTATCTCTAATTTCGATAAGAAGGGGCTCACTGCAAGAGACATGGTTACTTTATCCGGTGCCCACACAATTGGACAAGCTCAATGCTTAACATTTCGTGAAAGGATATACAACAACGCAAGTGACATTGATGCAGGTTTTGCTAGCACTCGTCAACGTGGTTGTCCATCCGTTATCAGTGATGATAATAATAAGAAATTGGCAGCACTAGACTTGGTCACACCCAATTCATTTGATAACAACTACTTCAAGAATTTGATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTCTCTTTAGTGGTGGATCTACTGATTCTGTTGTTTCCGAATACAGCAATAACCCAACAACTTTTAAGTCTGACTTCGCAGCTGCGATGATAAAGATGGGAGATATTGCACCGTTAACTGGATCAGCTGGAATCATAAGAAAGATTTGCAGCTCTATCAACTAA 780 0.4256 MAYRTSSITSLFVTVLVLLGTTCDAQLSSTFYDSACPNALSTIRSVIRSAVSAERRMAASLIRLHFHDCFVQVGGPSWTVKLGRRDSTTASKSLATSDLPRFTDDLNTLISNFDKKGLTARDMVTLSGAHTIGQAQCLTFRERIYNNASDIDAGFASTRQRGCPSVISDDNNKKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSVVSEYSNNPTTFKSDFAAAMIKMGDIAPLTGSAGIIRKICSSIN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2398 259 PANTHER PEROXIDASE 72-RELATED 8 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PANTHER PEROXIDASE 72-RELATED 73 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 Gene3D - 73 259 - -
Aed1g2398 259 Pfam Peroxidase 73 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 ProSitePatterns Peroxidases proximal heme-ligand signature. 122 132 IPR019793 -
Aed1g2398 259 CDD secretory_peroxidase 26 258 IPR033905 GO:0004601|GO:0042744
Aed1g2398 259 Gene3D Peroxidase, domain 2 100 238 - -
Aed1g2398 259 SUPERFAMILY Heme-dependent peroxidases 26 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Aed1g2398 259 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PANTHER PEROXIDASE 73 258 - -
Aed1g2398 259 ProSiteProfiles Plant heme peroxidase family profile. 33 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2398 259 PANTHER PEROXIDASE 8 72 - -
Aed1g2398 259 Gene3D - 26 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2398 Aed-Chr1 19965108 19966408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2398 11 72 Peroxidase AT1G14550 61.290 6.73e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2398 K00430 - gmx:100786161 348.591