Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2382 ATGACTTCCAAAGCTTCCCACCCAGATTCAATTGATGCATTGAAGTCTAAAATGTCTGTTCAAAAGGATCCAAATAAGTTCTTCATGTCCATCACTGAAGGAGAGAAAAAGCCATTTGACTTTTTACGTGTTCTATATGATGGTTGCATTGCTGGAGGTGCTGCTGGTGTTGTTGTAGAAACAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTTGCTCGTGATGGAGGAAAAATTGTTATGAAGGGTCTGTACTCTGGATTGTCTGGAAATCTTGTTGGTGTCTTACCAGCTTCTGCAATTTTTATTGGTGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCATTGCCTGAGAATCTCAGTGCCGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTATTGTTCGGGTTCCAACTGAGGTTGTTAAGCAAAGGATTCAGATTGGGCAATTTAGATCAGCCCCAGATGCTGTTCGTCTTATTGTCGCTAATGAGGGTTTTAACGGTCTTTTTGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCTATAGAATTATGCATTTATGAGCAGCTTCGTATTGGGTACAAATTAGCAGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAATGGCTGGTGCTGTAGCTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGATTGATGGTTCAGGGATCACAAAACCATTACAAAGGCATTTCTGATTGTGTGAGAATAATAGTTAAAGAAGAAGGAAGTCATGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTGGAGGTTCAATATTTTTTTGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGGCGGCTACCCAAAGCCGAGACTCAGAATTGA 945 0.4116 MTSKASHPDSIDALKSKMSVQKDPNKFFMSITEGEKKPFDFLRVLYDGCIAGGAAGVVVETALYPIDTIKTRLQVARDGGKIVMKGLYSGLSGNLVGVLPASAIFIGVYEPTKQQLLKSLPENLSAVAHFAAGAIGGIASSIVRVPTEVVKQRIQIGQFRSAPDAVRLIVANEGFNGLFAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAMAGAVAGAVTTPLDVVKTRLMVQGSQNHYKGISDCVRIIVKEEGSHALFKGIGPRVLWIGVGGSIFFCVLEKTKQILAQRRLPKAETQN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2382 314 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 4 311 - -
Aed1g2382 314 Gene3D Mitochondrial carrier domain 45 312 IPR023395 -
Aed1g2382 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Aed1g2382 314 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Aed1g2382 314 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Aed1g2382 314 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Aed1g2382 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 115 IPR018108 -
Aed1g2382 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Aed1g2382 314 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Aed1g2382 314 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 4 311 - -
Aed1g2382 314 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Aed1g2382 314 Pfam Mitochondrial carrier protein 48 118 IPR018108 -
Aed1g2382 314 Pfam Mitochondrial carrier protein 219 304 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2382 Aed-Chr1 19836079 19845126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2382 132 309 Chloroplast and Mitochondria Gene Families AT2G30160 29.032 1.86e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2382 K15111 - gmx:100800051 513.842