LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed1g2372	ATGACACAATGTCCCATCAAATTTCAAATCCAATTAATAAACTTTAATGTTCCTTCAGCCACCGACTTGCCATTGTCTTTGTGTTTGTCTAATTATTTGTTTATTTGTTTCCTGGAGAGACTATTATTGGATGGATCAGCAAGTGGACCGGGTGAGAAAGAAGCACCGCCAAACTTGACTTTGAGACCCGAGGCCTTTAAGATCATCGAAAACATTCGTCGTCTTTTGGAGAAGAGCTGTGGAAGAGTCGTCTCCTGCTCCGACATCACTGCCCTCGCTGCACGTGACGCTGTTTTCATCTCAGGAGGACCAGACTATGAGATTCCATTGGGAAGGAGAGACGGACTGACCTTTGCCTCGAGACAAGTGACATTGGACAACCTTCCACCACCGTCGAGCAACGCCTCCACCATCCTAAGCTCACTCGCAACCAAAAACCTCGACCCCACCGATGTAGTAGCTCTCTCAGGTGGGCACACCATAGGAATCAGCCACTGCAGTTCCTTCACGAATAGGCTATACCCCACACAAGACCCCGTGATGGACAAAACCTTCGGCAACAACCTCAGACGCACGTGCCCCGCAAGCACCACCGACAACACCACAGTGTTGGACATTCGGTCCCCCAACACGTTCGACAACAAGTACTACGTTGACCTGATGAACCGCCAGGGGATCTTCACCTCCGATCAGGACCTCTACACCGATAAGAGGACCAAGGGAATCGTCACCGACTTTGCCGTTGACCAGAACCTCTTCTTTCAGAAGTTTGTGTTCGCTATGCTCAAGATGGGTCAGCTTAACGTGCTGACGGGGACACAAGGGGAGATTCGTGCCAATTGCTCCGTTAGAAACGCCAATAACAAGTCCTTCTTGACTACTGTGGTCGAAGAAGCGGTGGAAACATTGATAGGAATGTAA	921	0.4951	MTQCPIKFQIQLINFNVPSATDLPLSLCLSNYLFICFLERLLLDGSASGPGEKEAPPNLTLRPEAFKIIENIRRLLEKSCGRVVSCSDITALAARDAVFISGGPDYEIPLGRRDGLTFASRQVTLDNLPPPSSNASTILSSLATKNLDPTDVVALSGGHTIGISHCSSFTNRLYPTQDPVMDKTFGNNLRRTCPASTTDNTTVLDIRSPNTFDNKYYVDLMNRQGIFTSDQDLYTDKRTKGIVTDFAVDQNLFFQKFVFAMLKMGQLNVLTGTQGEIRANCSVRNANNKSFLTTVVEEAVETLIGM	306

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed1g2372	306	Gene3D	-	41	282	-	-
	Aed1g2372	306	Pfam	Peroxidase	50	248	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Aed1g2372	306	PANTHER	PEROXIDASE	41	288	-	-
	Aed1g2372	306	Gene3D	Peroxidase, domain 2	130	265	-	-
	Aed1g2372	306	SUPERFAMILY	Heme-dependent peroxidases	42	285	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Aed1g2372	306	ProSiteProfiles	Plant heme peroxidase family profile.	41	285	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Aed1g2372	306	PANTHER	PEROXIDASE 25-RELATED	41	288	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Aed1g2372	306	CDD	secretory_peroxidase	41	283	IPR033905	GO:0004601\|GO:0042744
	Aed1g2372	306	PRINTS	Plant peroxidase signature	102	117	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Aed1g2372	306	PRINTS	Plant peroxidase signature	203	218	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 20 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed1g2372	Aed-Chr1	19758160	19760061	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed1g2372	36	306	Peroxidase	AT1G71695	64.000	8.36e-131	374

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed1g2372	K00430		-	gmx:100775837	501.901

Showing 1 to 1 of 1 entries