Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2372 ATGACACAATGTCCCATCAAATTTCAAATCCAATTAATAAACTTTAATGTTCCTTCAGCCACCGACTTGCCATTGTCTTTGTGTTTGTCTAATTATTTGTTTATTTGTTTCCTGGAGAGACTATTATTGGATGGATCAGCAAGTGGACCGGGTGAGAAAGAAGCACCGCCAAACTTGACTTTGAGACCCGAGGCCTTTAAGATCATCGAAAACATTCGTCGTCTTTTGGAGAAGAGCTGTGGAAGAGTCGTCTCCTGCTCCGACATCACTGCCCTCGCTGCACGTGACGCTGTTTTCATCTCAGGAGGACCAGACTATGAGATTCCATTGGGAAGGAGAGACGGACTGACCTTTGCCTCGAGACAAGTGACATTGGACAACCTTCCACCACCGTCGAGCAACGCCTCCACCATCCTAAGCTCACTCGCAACCAAAAACCTCGACCCCACCGATGTAGTAGCTCTCTCAGGTGGGCACACCATAGGAATCAGCCACTGCAGTTCCTTCACGAATAGGCTATACCCCACACAAGACCCCGTGATGGACAAAACCTTCGGCAACAACCTCAGACGCACGTGCCCCGCAAGCACCACCGACAACACCACAGTGTTGGACATTCGGTCCCCCAACACGTTCGACAACAAGTACTACGTTGACCTGATGAACCGCCAGGGGATCTTCACCTCCGATCAGGACCTCTACACCGATAAGAGGACCAAGGGAATCGTCACCGACTTTGCCGTTGACCAGAACCTCTTCTTTCAGAAGTTTGTGTTCGCTATGCTCAAGATGGGTCAGCTTAACGTGCTGACGGGGACACAAGGGGAGATTCGTGCCAATTGCTCCGTTAGAAACGCCAATAACAAGTCCTTCTTGACTACTGTGGTCGAAGAAGCGGTGGAAACATTGATAGGAATGTAA 921 0.4951 MTQCPIKFQIQLINFNVPSATDLPLSLCLSNYLFICFLERLLLDGSASGPGEKEAPPNLTLRPEAFKIIENIRRLLEKSCGRVVSCSDITALAARDAVFISGGPDYEIPLGRRDGLTFASRQVTLDNLPPPSSNASTILSSLATKNLDPTDVVALSGGHTIGISHCSSFTNRLYPTQDPVMDKTFGNNLRRTCPASTTDNTTVLDIRSPNTFDNKYYVDLMNRQGIFTSDQDLYTDKRTKGIVTDFAVDQNLFFQKFVFAMLKMGQLNVLTGTQGEIRANCSVRNANNKSFLTTVVEEAVETLIGM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2372 306 Gene3D - 41 282 - -
Aed1g2372 306 Pfam Peroxidase 50 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PANTHER PEROXIDASE 41 288 - -
Aed1g2372 306 Gene3D Peroxidase, domain 2 130 265 - -
Aed1g2372 306 SUPERFAMILY Heme-dependent peroxidases 42 285 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 ProSiteProfiles Plant heme peroxidase family profile. 41 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PANTHER PEROXIDASE 25-RELATED 41 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 CDD secretory_peroxidase 41 283 IPR033905 GO:0004601|GO:0042744
Aed1g2372 306 PRINTS Plant peroxidase signature 102 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Plant peroxidase signature 203 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Plant peroxidase signature 259 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Plant peroxidase signature 83 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Plant peroxidase signature 64 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Plant peroxidase signature 219 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Plant peroxidase signature 150 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 151 161 IPR019793 -
Aed1g2372 306 PRINTS Haem peroxidase superfamily signature 151 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Haem peroxidase superfamily signature 102 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2372 306 PRINTS Haem peroxidase superfamily signature 84 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2372 Aed-Chr1 19758160 19760061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2372 36 306 Peroxidase AT1G71695 64.000 8.36e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2372 K00430 - gmx:100775837 501.901