Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2366 | ATGCAAGGGAGGAGCAGTACTGTTGTAGGTTCGGTAATTCCGAGCCATGTGGTGTCACCCCAAACCAACGCGGAGTGGGTCCCGGAAAGTGGTTTTCCCATGATGTCGTCACGTTTTATGCATGCGCCCTCTTCTCCTGGGCCTCCTCTCTTGGGCTCCTCTGCCTCTGCTTGGGTTGGACACAAGAGAGCGCGTGAAGACGACACTGGTGCTGGCGCGAGTGCGGGTGTTGTTGCTGCAGCAGCAGCTTCTTCACAAACACAAACACAAGGGAGTGAAAGTGTTTCAAATTCAAACGAAGAAAGTGGTGGCGAGAGGAGAAGGAGATACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATTCGCGATCCTCACAAAGCGGCGAGAGTGTGGCTTGGGACATTCGACACTGCCGAGGCTGCAGCGAGAGCCTACGATGAAGCCGCATTGAGGTTCAGAGGTAACAGAGCCAAACTTAATTTCCCCGAAAACGTTGCCCCGGTTCGCCCTCCGCTTCCTAATTTACCGGCAACTGTGGTTGCCGGTTCTGGTTCCGGTTCCGGTTCTGGTTTCGTAGCGACAGGTTTTACTCCGACGTTGATGCAAGGGGCACCAATTCAGGGATCCTCTGATTTTTTGAGAGACTATTGGGGGTATTCTCAGCTGCTGAGGAGCACAGGGGAATTCCAAGGACTCGACCAGTGGTTCTTTGATTCGCAAATGGCAGCGTTTCAATCTTCTTCGTCCTCGTTGTTACCACCGCAACCGCCGCCGTCGTTATTGCCTTCCCCTGCTTCGTTTCCTCTGTTTGCTTCTAGCCAGCACATGGGAATGGTTTTCCGGCCGCCGGGAGAGCAGGCTCGCGCCGGAGAAGACGGTGGCAGCGGGTCAGAGTTTTCAGTGCTTCCACCTTCTACGTGGTCAGATACCAGTGGCTATCCTCCTCCTCCTCCTGGTTGA | 972 | 0.5525 | MQGRSSTVVGSVIPSHVVSPQTNAEWVPESGFPMMSSRFMHAPSSPGPPLLGSSASAWVGHKRAREDDTGAGASAGVVAAAAASSQTQTQGSESVSNSNEESGGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVAPVRPPLPNLPATVVAGSGSGSGSGFVATGFTPTLMQGAPIQGSSDFLRDYWGYSQLLRSTGEFQGLDQWFFDSQMAAFQSSSSSLLPPQPPPSLLPSPASFPLFASSQHMGMVFRPPGEQARAGEDGGSGSEFSVLPPSTWSDTSGYPPPPPG | 323 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2366 | 323 | ProSiteProfiles | AP2/ERF domain profile. | 109 | 166 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | MobiDBLite | consensus disorder prediction | 282 | 323 | - | - | |
Aed1g2366 | 323 | SUPERFAMILY | DNA-binding domain | 109 | 167 | IPR016177 | GO:0003677 | |
Aed1g2366 | 323 | MobiDBLite | consensus disorder prediction | 38 | 115 | - | - | |
Aed1g2366 | 323 | MobiDBLite | consensus disorder prediction | 80 | 99 | - | - | |
Aed1g2366 | 323 | PRINTS | Ethylene responsive element binding protein signature | 110 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | PRINTS | Ethylene responsive element binding protein signature | 132 | 148 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Aed1g2366 | 323 | CDD | AP2 | 117 | 168 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | SMART | rav1_2 | 109 | 172 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | Pfam | AP2 domain | 109 | 158 | IPR001471 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | Gene3D | AP2/ERF domain | 108 | 168 | IPR036955 | GO:0003700|GO:0006355 | |
Aed1g2366 | 323 | PANTHER | DNA-BINDING DOMAIN | 65 | 279 | IPR044808 | GO:0003700|GO:0009873 | |
Aed1g2366 | 323 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 | 65 | 279 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2366 | Aed-Chr1 | 19722991 | 19723962 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2366 | 92 | 169 | AP2-EREBP Transcription Factor Family | AT5G61890 | 71.795 | 1.80e-34 | 124 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Aed1g2366 | AP2 | 5.7e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2366 | - | - | gmx:100802242 | 357.451 |