Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2348 ATGGAAGGGAATTTGTCACAGGGAGGAGGTATAATTCAAGGTGGGACTTCTTTTGGTGGCTTTGATTTGCCGGGTTCGGTTCGTGTTCAGCAGCATCAAGCACAGCATCCTCATACCATGCACCAACATCAAACTCATCCGCGTCAAGGGTCTTCTGTGCATTCCGCGGTTCATGATGGTTTTCCACTTACAATGGGAACCATGCAGAACTGTGACCAAACCATTTCATTGACTGACTTTAGTAAAGGAGACAGAAGCAAAAACTCAGCTAGTGAGGATGACGAGCCAAGCTTTACTGAGGATGGTGTTGATTGTCACCATGAATCGAGTAGAGGGAAGAAAGGATCACCTTGGCAGCGGGTGAAGTGGACCGATAAGATGGTAAGGCTTCTGATAACAGCTGTTTCTTATATAGGCGAGGATGTAACTGCTGATGGTGGTAGCAGCGGGAGAAGAAAGTTTGCAGTCTTACAGAAGAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGGGGTTATCATGTTTCACCTCAGCAATGCGAGGATAAATTCAATGACCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTAGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCGCTGTTGGATGTAATCGATTTTCTTTCCGAGAAAGAAAAGGACGATGTTCGGAAAATATTAAGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCTTATCATAACGGCCAAGAAGATGCTAATACTTTTGGTAACTCTTTAAATTGTCAGGACTACAACAAAAGTTCTTATCCCCATGGACAGATGGTCCAATCTGATGTGAATCAAGGTTTACCTGAAGGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCACACTTCAGTTAGATGAACAAAAGCTACAAATTCAGGTCGAGATGCTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCGGGAGTTGGAGAAGCTGAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTGAAGCGAAAGGAAATGGGCACTGGCTTTAAATAG 1107 0.4273 MEGNLSQGGGIIQGGTSFGGFDLPGSVRVQQHQAQHPHTMHQHQTHPRQGSSVHSAVHDGFPLTMGTMQNCDQTISLTDFSKGDRSKNSASEDDEPSFTEDGVDCHHESSRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDVTADGGSSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDFLSEKEKDDVRKILSSKHLFYEEMCSYHNGQEDANTFGNSLNCQDYNKSSYPHGQMVQSDVNQGLPEGMRAAWLQKQWVESRTLQLDEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMGTGFK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2348 368 Coils Coil 330 362 - -
Aed1g2348 368 Pfam Myb/SANT-like DNA-binding domain 120 246 IPR044822 -
Aed1g2348 368 PANTHER FACTOR, PUTATIVE-RELATED 255 367 - -
Aed1g2348 368 PANTHER FACTOR, PUTATIVE-RELATED 1 250 - -
Aed1g2348 368 MobiDBLite consensus disorder prediction 85 117 - -
Aed1g2348 368 MobiDBLite consensus disorder prediction 28 52 - -
Aed1g2348 368 MobiDBLite consensus disorder prediction 78 117 - -
Aed1g2348 368 MobiDBLite consensus disorder prediction 1 65 - -
Aed1g2348 368 Gene3D - 123 195 - -
Aed1g2348 368 PANTHER F16F4.11 PROTEIN-RELATED 255 367 - -
Aed1g2348 368 PANTHER F16F4.11 PROTEIN-RELATED 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2348 Aed-Chr1 19509141 19510493 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed1g2348 Myb_DNA-bind_4 3.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2348 - - gmx:100812134 464.536