Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g2345 | ATGGGGAGGAAGAAGCCGACGGCGAAGGACGAAGAGAACGCGTCGCAGCAAGGCGGCGGCGGCGGGAAATCGAAGAAGAAGGCGATGGTCATCGACGACGATGAGTATTCCGTCGTAACGGAGGTTTCCGAGGAGCCGGCGCCGGAAGAGAAACCCGCTGCGGCGGGAAAGAAGAAAGGTAATGCCAAAGCTAAGAGTAATGATGATGATTTTGATGCTGTTGATGATGATGATGAGGATATTCCTGCAATTGTGTTTGCTGGAAAGAAGAAAGGGAAGAATAAGAAAGGTGGTGGGAGCAGTGCGTTCACTGCTTCTGCCTTTGGTTTGCTTGGTGATGAGGGAGATGATGACGATGATGAAGAGAAACCCGATGAGGTTGATGGTGAGGAAGAGGATGAGCCAGTGATTAGTTTTTCTGGCAAGAAGAAGTCCGCTAAGGGTTCGAAGAAAGGTGGGGGCAGTTTGTTCTCTGCCTCGTCTTTTGATGCTATTGACGGTGATGGTGATGTGGTGGATGTTGATGATGATGATGAGCCTGTTATTGCTTTCACTGGGAAGAAGAAGTCTTCCAAAGGGAGTAAAAAGGGGGGTTCTGTGTTTTCGGCTGCTGTTCTTGGCGAGATTGATGACGAGGAGGAGAATAAGGATGATGGTGGTGATGATGACGATATTGGACCAATCACGTTCTCTGGTAAGAAAAAGAAGTCTTCCAAAAAGGCTGCTGCTAATTCTGTGAGCAAAGGTGCTTCTGTTGAGGATGATGTTTCTGTACCTGATGACAAGGATGAGGACGATGTTTCTTTAGTTGCGTTTTCAGGTAAAAAGAAGCCTTCTAAAAAGAAGGGCAGCAGTACTGCTGCCAAAGGGAGTGATGAAAATGTGGATGCAGTGGAGCCTGAGGCACCTGATGCTGGCAACAACAACGCAAATAAGACTGAGGAGGTGGCTGGAACATCCAAAAATAAAAAGAAGAATAAGAAGAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTGGACAAACTTCTTGCAGAGCTTGGCGAGGCCCCCTCTGTACCTAAACCCACAACTCCGCCACAGGATGATAAAGTTCAGCCTACTCCCGAAGCAGTACCTGTTGCCGATGCTTCAGGGGAAAAGGAGGATGAGGAGGAGACTGTAGAGACGGCTGCTGCAAAGAAGAAAAAGAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCAGCAGCAGCAGGAACTGCACCAGAAAATGAAACAGCAGAAGTTAAAGAAGAGGTAATTGAACCAAAGAAGAATGACACAAAGGCTAAAAAAGCACTTGATAAGAAAGTCCCAAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGACAGGAGGCTGAAGAAAGGAAGAAAAGAGAAGAGGAGGAAAAGTTAAGGAAGGAGGAAGAGGAGCGACTTAAGCAAGAGGAACTTGAGAGACAAGCAGAAGAGGCTAGACGTAGAAAGAAGGAAAGAGAAAAGGAGAAACTCCAGAAAAAAAAGCAAGAAGGTAAACTCTTAACTGGTAAGCAGAAGGAAGAAGCTCGCCGTCTAGAGGCAATGAGAAGGCAGATTCTCAATAACACAGGGGGTATGACTCTCCCTGCTGGGGAAACTGGTGCTCCAGCCAAAAAACCCATATATCAGACAAAGAAGGGGAAATCAAATAATCGCAATCAGAATGGTGCTGCTACTGCTCAGACAGCTGAAAGTGTTGAAGCAAAGGAGATTGCCTCTGATGTATCTTCAGAGGAACCAGAAAATATTGAAAAAGTGGAGTCAATCCAGGTGGAAGACAAAGTTGAACTTCCTGTAGTTGTTGAAGAGGATGGAGCAGAAGATGATGACGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAAGGTGCATTTGCCGATGAAGAGGCAGACTCAGAGCCTGAACCTATAGTCAAAAAGGAGATTAAAAATGCTATACCTACTCAGAATGCCGGTGCTAAGCCTGTGGCTGAAGAAAATGAAAATGGAAAACAGTCTAATGCTGTCAGGGGACCGAGAAAGTCTGTTGTGCCTCCTAAGCCTAATGATGAAAACCTCCGCTCCCCAATCTGCTGTATCATGGGGCATGTGGATACTGGCAAAACCAAGCTGCTGGATTGTATTCGTGGTACTAATGTTCAGGAGGGTGAGGCTGGCGGCATCACACAACAGATTGGTGCTACATACTTTCCTGCTGAGAACATACGTGAAAGAACGAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCTGGTTTACTGGTTATTGATACCCCAGGTCATGAGTCATTTACTAACTTGAGGTCTCGGGGTTCAGGCTTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGGTTAGAGCAACAAACAATAGAATCGCTAAATTTGTTGAAAATGAGGAATACAGAATTCATTGTTGCCTTAAATAAGGTTGATAGGCTTTATGGATGGAAAACATGCCGCAATGCTCCAATTGTTAAAGCAATGAAGCAGCAGACTAAGGATGTTCAAAATGAGTTTAATATGAGGCTCACTCAGATTATTACTGAATTCAAAGAACAAGGGATGAACACTGAGTTGTATTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATTCCTGATTTGTTATTACTATTGGTTCAATGGACCCAAAAGACAATGATTGATAAACTTACATACAGTGAAGAAGTGCAGTGTACTGTTTTAGAGGTGAAGGTAGTTGAAGGACATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATTGTTGTATGCGGAATGCAGGGTCCAATTGTTACCTCAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTCAAGGGAACATATATTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGCCTTGAACATGCCATTGCTGGTACTGGTTTATATGTGGTGAAGCCTGATGATGATTTGGAAGATGTTAAAGAATCAGCCATGGAAGATATGCGGTCAATTGGAACTCCAATTTGCATTCCTTCTAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCTGTTGATTATGCGAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAGCAACAAAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAACTTGTGAGCCATATATCACGGAGATCTATTGATATACTCAAAACTAATTATCGGGATGAACTATCTATTGACGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA | 3447 | 0.4352 | MGRKKPTAKDEENASQQGGGGGKSKKKAMVIDDDEYSVVTEVSEEPAPEEKPAAAGKKKGNAKAKSNDDDFDAVDDDDEDIPAIVFAGKKKGKNKKGGGSSAFTASAFGLLGDEGDDDDDEEKPDEVDGEEEDEPVISFSGKKKSAKGSKKGGGSLFSASSFDAIDGDGDVVDVDDDDEPVIAFTGKKKSSKGSKKGGSVFSAAVLGEIDDEEENKDDGGDDDDIGPITFSGKKKKSSKKAAANSVSKGASVEDDVSVPDDKDEDDVSLVAFSGKKKPSKKKGSSTAAKGSDENVDAVEPEAPDAGNNNANKTEEVAGTSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPSVPKPTTPPQDDKVQPTPEAVPVADASGEKEDEEETVETAAAKKKKKKKEKEKEKKAAAAAAAAGTAPENETAEVKEEVIEPKKNDTKAKKALDKKVPKHVREMQEALARRQEAEERKKREEEEKLRKEEEERLKQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNNTGGMTLPAGETGAPAKKPIYQTKKGKSNNRNQNGAATAQTAESVEAKEIASDVSSEEPENIEKVESIQVEDKVELPVVVEEDGAEDDDEDEWDAKSWDDVNLNAKGAFADEEADSEPEPIVKKEIKNAIPTQNAGAKPVAEENENGKQSNAVRGPRKSVVPPKPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKAMKQQTKDVQNEFNMRLTQIITEFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMIDKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYIHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDVKESAMEDMRSIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDELSIDEWRLVVKLKNLFKIQ | 1148 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 562 | 580 | - | - | |
Aed1g2345 | 1148 | PRINTS | GTP-binding elongation factor signature | 793 | 804 | IPR000795 | GO:0003924|GO:0005525 | |
Aed1g2345 | 1148 | PRINTS | GTP-binding elongation factor signature | 777 | 787 | IPR000795 | GO:0003924|GO:0005525 | |
Aed1g2345 | 1148 | PRINTS | GTP-binding elongation factor signature | 713 | 726 | IPR000795 | GO:0003924|GO:0005525 | |
Aed1g2345 | 1148 | PRINTS | GTP-binding elongation factor signature | 829 | 838 | IPR000795 | GO:0003924|GO:0005525 | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 44 | 70 | - | - | |
Aed1g2345 | 1148 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1048 | 1148 | IPR015760 | - | |
Aed1g2345 | 1148 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1 | 1048 | IPR015760 | - | |
Aed1g2345 | 1148 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 1048 | 1148 | - | - | |
Aed1g2345 | 1148 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 1 | 1048 | - | - | |
Aed1g2345 | 1148 | Pfam | Elongation factor Tu domain 2 | 948 | 1023 | IPR004161 | GO:0005525 | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
Aed1g2345 | 1148 | SUPERFAMILY | Translation proteins | 1048 | 1147 | IPR009000 | - | |
Aed1g2345 | 1148 | Coils | Coil | 448 | 519 | - | - | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 112 | 134 | - | - | |
Aed1g2345 | 1148 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 709 | 1000 | IPR027417 | - | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 422 | 533 | - | - | |
Aed1g2345 | 1148 | Gene3D | Translation factors | 932 | 1050 | - | - | |
Aed1g2345 | 1148 | Pfam | Elongation factor Tu GTP binding domain | 713 | 921 | IPR000795 | GO:0003924|GO:0005525 | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 589 | 619 | - | - | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 330 | 345 | - | - | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 1 | 637 | - | - | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 667 | 705 | - | - | |
Aed1g2345 | 1148 | Coils | Coil | 374 | 413 | - | - | |
Aed1g2345 | 1148 | Gene3D | - | 703 | 931 | IPR027417 | - | |
Aed1g2345 | 1148 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 709 | 925 | IPR000795 | GO:0003924|GO:0005525 | |
Aed1g2345 | 1148 | CDD | IF2_eIF5B | 712 | 922 | - | - | |
Aed1g2345 | 1148 | MobiDBLite | consensus disorder prediction | 620 | 635 | - | - | |
Aed1g2345 | 1148 | CDD | aeIF5B_II | 933 | 1043 | - | - | |
Aed1g2345 | 1148 | TIGRFAM | small_GTP: small GTP-binding protein domain | 714 | 853 | IPR005225 | GO:0005525 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g2345 | Aed-Chr1 | 19482237 | 19490475 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g2345 | 1041 | 1148 | Eukaryotic Initiation Factors Gene Family | AT1G76810 | 82.407 | 2.89e-51 | 196 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g2345 | K03243 | - | gmx:100814875 | 1300.8 |