Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2345 ATGGGGAGGAAGAAGCCGACGGCGAAGGACGAAGAGAACGCGTCGCAGCAAGGCGGCGGCGGCGGGAAATCGAAGAAGAAGGCGATGGTCATCGACGACGATGAGTATTCCGTCGTAACGGAGGTTTCCGAGGAGCCGGCGCCGGAAGAGAAACCCGCTGCGGCGGGAAAGAAGAAAGGTAATGCCAAAGCTAAGAGTAATGATGATGATTTTGATGCTGTTGATGATGATGATGAGGATATTCCTGCAATTGTGTTTGCTGGAAAGAAGAAAGGGAAGAATAAGAAAGGTGGTGGGAGCAGTGCGTTCACTGCTTCTGCCTTTGGTTTGCTTGGTGATGAGGGAGATGATGACGATGATGAAGAGAAACCCGATGAGGTTGATGGTGAGGAAGAGGATGAGCCAGTGATTAGTTTTTCTGGCAAGAAGAAGTCCGCTAAGGGTTCGAAGAAAGGTGGGGGCAGTTTGTTCTCTGCCTCGTCTTTTGATGCTATTGACGGTGATGGTGATGTGGTGGATGTTGATGATGATGATGAGCCTGTTATTGCTTTCACTGGGAAGAAGAAGTCTTCCAAAGGGAGTAAAAAGGGGGGTTCTGTGTTTTCGGCTGCTGTTCTTGGCGAGATTGATGACGAGGAGGAGAATAAGGATGATGGTGGTGATGATGACGATATTGGACCAATCACGTTCTCTGGTAAGAAAAAGAAGTCTTCCAAAAAGGCTGCTGCTAATTCTGTGAGCAAAGGTGCTTCTGTTGAGGATGATGTTTCTGTACCTGATGACAAGGATGAGGACGATGTTTCTTTAGTTGCGTTTTCAGGTAAAAAGAAGCCTTCTAAAAAGAAGGGCAGCAGTACTGCTGCCAAAGGGAGTGATGAAAATGTGGATGCAGTGGAGCCTGAGGCACCTGATGCTGGCAACAACAACGCAAATAAGACTGAGGAGGTGGCTGGAACATCCAAAAATAAAAAGAAGAATAAGAAGAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTGGACAAACTTCTTGCAGAGCTTGGCGAGGCCCCCTCTGTACCTAAACCCACAACTCCGCCACAGGATGATAAAGTTCAGCCTACTCCCGAAGCAGTACCTGTTGCCGATGCTTCAGGGGAAAAGGAGGATGAGGAGGAGACTGTAGAGACGGCTGCTGCAAAGAAGAAAAAGAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCAGCAGCAGCAGGAACTGCACCAGAAAATGAAACAGCAGAAGTTAAAGAAGAGGTAATTGAACCAAAGAAGAATGACACAAAGGCTAAAAAAGCACTTGATAAGAAAGTCCCAAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGACAGGAGGCTGAAGAAAGGAAGAAAAGAGAAGAGGAGGAAAAGTTAAGGAAGGAGGAAGAGGAGCGACTTAAGCAAGAGGAACTTGAGAGACAAGCAGAAGAGGCTAGACGTAGAAAGAAGGAAAGAGAAAAGGAGAAACTCCAGAAAAAAAAGCAAGAAGGTAAACTCTTAACTGGTAAGCAGAAGGAAGAAGCTCGCCGTCTAGAGGCAATGAGAAGGCAGATTCTCAATAACACAGGGGGTATGACTCTCCCTGCTGGGGAAACTGGTGCTCCAGCCAAAAAACCCATATATCAGACAAAGAAGGGGAAATCAAATAATCGCAATCAGAATGGTGCTGCTACTGCTCAGACAGCTGAAAGTGTTGAAGCAAAGGAGATTGCCTCTGATGTATCTTCAGAGGAACCAGAAAATATTGAAAAAGTGGAGTCAATCCAGGTGGAAGACAAAGTTGAACTTCCTGTAGTTGTTGAAGAGGATGGAGCAGAAGATGATGACGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAAGGTGCATTTGCCGATGAAGAGGCAGACTCAGAGCCTGAACCTATAGTCAAAAAGGAGATTAAAAATGCTATACCTACTCAGAATGCCGGTGCTAAGCCTGTGGCTGAAGAAAATGAAAATGGAAAACAGTCTAATGCTGTCAGGGGACCGAGAAAGTCTGTTGTGCCTCCTAAGCCTAATGATGAAAACCTCCGCTCCCCAATCTGCTGTATCATGGGGCATGTGGATACTGGCAAAACCAAGCTGCTGGATTGTATTCGTGGTACTAATGTTCAGGAGGGTGAGGCTGGCGGCATCACACAACAGATTGGTGCTACATACTTTCCTGCTGAGAACATACGTGAAAGAACGAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCTGGTTTACTGGTTATTGATACCCCAGGTCATGAGTCATTTACTAACTTGAGGTCTCGGGGTTCAGGCTTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGGTTAGAGCAACAAACAATAGAATCGCTAAATTTGTTGAAAATGAGGAATACAGAATTCATTGTTGCCTTAAATAAGGTTGATAGGCTTTATGGATGGAAAACATGCCGCAATGCTCCAATTGTTAAAGCAATGAAGCAGCAGACTAAGGATGTTCAAAATGAGTTTAATATGAGGCTCACTCAGATTATTACTGAATTCAAAGAACAAGGGATGAACACTGAGTTGTATTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATTCCTGATTTGTTATTACTATTGGTTCAATGGACCCAAAAGACAATGATTGATAAACTTACATACAGTGAAGAAGTGCAGTGTACTGTTTTAGAGGTGAAGGTAGTTGAAGGACATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATTGTTGTATGCGGAATGCAGGGTCCAATTGTTACCTCAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTCAAGGGAACATATATTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGCCTTGAACATGCCATTGCTGGTACTGGTTTATATGTGGTGAAGCCTGATGATGATTTGGAAGATGTTAAAGAATCAGCCATGGAAGATATGCGGTCAATTGGAACTCCAATTTGCATTCCTTCTAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCTGTTGATTATGCGAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAGCAACAAAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAACTTGTGAGCCATATATCACGGAGATCTATTGATATACTCAAAACTAATTATCGGGATGAACTATCTATTGACGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA 3447 0.4352 MGRKKPTAKDEENASQQGGGGGKSKKKAMVIDDDEYSVVTEVSEEPAPEEKPAAAGKKKGNAKAKSNDDDFDAVDDDDEDIPAIVFAGKKKGKNKKGGGSSAFTASAFGLLGDEGDDDDDEEKPDEVDGEEEDEPVISFSGKKKSAKGSKKGGGSLFSASSFDAIDGDGDVVDVDDDDEPVIAFTGKKKSSKGSKKGGSVFSAAVLGEIDDEEENKDDGGDDDDIGPITFSGKKKKSSKKAAANSVSKGASVEDDVSVPDDKDEDDVSLVAFSGKKKPSKKKGSSTAAKGSDENVDAVEPEAPDAGNNNANKTEEVAGTSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPSVPKPTTPPQDDKVQPTPEAVPVADASGEKEDEEETVETAAAKKKKKKKEKEKEKKAAAAAAAAGTAPENETAEVKEEVIEPKKNDTKAKKALDKKVPKHVREMQEALARRQEAEERKKREEEEKLRKEEEERLKQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNNTGGMTLPAGETGAPAKKPIYQTKKGKSNNRNQNGAATAQTAESVEAKEIASDVSSEEPENIEKVESIQVEDKVELPVVVEEDGAEDDDEDEWDAKSWDDVNLNAKGAFADEEADSEPEPIVKKEIKNAIPTQNAGAKPVAEENENGKQSNAVRGPRKSVVPPKPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKAMKQQTKDVQNEFNMRLTQIITEFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMIDKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYIHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDVKESAMEDMRSIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDELSIDEWRLVVKLKNLFKIQ 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2345 1148 MobiDBLite consensus disorder prediction 562 580 - -
Aed1g2345 1148 PRINTS GTP-binding elongation factor signature 793 804 IPR000795 GO:0003924|GO:0005525
Aed1g2345 1148 PRINTS GTP-binding elongation factor signature 777 787 IPR000795 GO:0003924|GO:0005525
Aed1g2345 1148 PRINTS GTP-binding elongation factor signature 713 726 IPR000795 GO:0003924|GO:0005525
Aed1g2345 1148 PRINTS GTP-binding elongation factor signature 829 838 IPR000795 GO:0003924|GO:0005525
Aed1g2345 1148 MobiDBLite consensus disorder prediction 44 70 - -
Aed1g2345 1148 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1048 1148 IPR015760 -
Aed1g2345 1148 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1048 IPR015760 -
Aed1g2345 1148 PANTHER PHOTOSYSTEM II PROTEIN D1 1048 1148 - -
Aed1g2345 1148 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1048 - -
Aed1g2345 1148 Pfam Elongation factor Tu domain 2 948 1023 IPR004161 GO:0005525
Aed1g2345 1148 MobiDBLite consensus disorder prediction 207 221 - -
Aed1g2345 1148 SUPERFAMILY Translation proteins 1048 1147 IPR009000 -
Aed1g2345 1148 Coils Coil 448 519 - -
Aed1g2345 1148 MobiDBLite consensus disorder prediction 112 134 - -
Aed1g2345 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 1000 IPR027417 -
Aed1g2345 1148 MobiDBLite consensus disorder prediction 422 533 - -
Aed1g2345 1148 Gene3D Translation factors 932 1050 - -
Aed1g2345 1148 Pfam Elongation factor Tu GTP binding domain 713 921 IPR000795 GO:0003924|GO:0005525
Aed1g2345 1148 MobiDBLite consensus disorder prediction 589 619 - -
Aed1g2345 1148 MobiDBLite consensus disorder prediction 330 345 - -
Aed1g2345 1148 MobiDBLite consensus disorder prediction 1 637 - -
Aed1g2345 1148 MobiDBLite consensus disorder prediction 667 705 - -
Aed1g2345 1148 Coils Coil 374 413 - -
Aed1g2345 1148 Gene3D - 703 931 IPR027417 -
Aed1g2345 1148 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 709 925 IPR000795 GO:0003924|GO:0005525
Aed1g2345 1148 CDD IF2_eIF5B 712 922 - -
Aed1g2345 1148 MobiDBLite consensus disorder prediction 620 635 - -
Aed1g2345 1148 CDD aeIF5B_II 933 1043 - -
Aed1g2345 1148 TIGRFAM small_GTP: small GTP-binding protein domain 714 853 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2345 Aed-Chr1 19482237 19490475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2345 1041 1148 Eukaryotic Initiation Factors Gene Family AT1G76810 82.407 2.89e-51 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2345 K03243 - gmx:100814875 1300.8