Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2344 ATGTATCCAAACAATGACGATGACCTTGAGCATCAGCAACAGCAACAACAAGAAGCCCTAGAAGAGGTTGAAACCAAAGACTTTGACTACTCAAAGAGATCACAGTGGCTACGTGCTGCAGTTTTAGGTGCCAACGACGGGTTAGTCTCAACAGCATCACTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATCAAAGTCATGATCCTAACGGGGTTTGCAGGGCTTGTTGCTGGTGCATGCAGCATGGCCATTGGTGAGTTTGTCTCTGTGCATTCTCAGTTGGACATAGAACTCGCTCAAATCAAAAGAGACAATAATAATAATATTAATGATGATGATGAGAAAGAGAAAGAGAAATTACCAAACCCTATACATGCCGCAGCTGCATCAGCTTTGGCGTTTTCAGTTGGTGCAATGGTGCCACTTCTTGCAGCATCTTTCATAAGGGACTATAAGGTGAGGCTTGGTGCAGTTTTGGGAGCAGTGAGTTTTGCTCTTGTGGTGTTTGGTTGGTTAGGGGCTGTGTTGGGTAAGGCTCCAACTTTGAGGTCTTGTGTCAGAGTCTTTCTTGGGGGTTGGCTAGCCATGGCTATTACTTTTGGGCTAACCAAGTTGATTGGGTCAAGCGGTCTTAATTAA 642 0.4517 MYPNNDDDLEHQQQQQQEALEEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVHSQLDIELAQIKRDNNNNINDDDEKEKEKLPNPIHAAAASALAFSVGAMVPLLAASFIRDYKVRLGAVLGAVSFALVVFGWLGAVLGKAPTLRSCVRVFLGGWLAMAITFGLTKLIGSSGLN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2344 213 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 15 209 - -
Aed1g2344 213 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 209 IPR008217 GO:0005384|GO:0030026
Aed1g2344 213 Coils Coil 6 26 - -
Aed1g2344 213 Pfam VIT family 37 119 IPR008217 GO:0005384|GO:0030026
Aed1g2344 213 Pfam VIT family 117 204 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2344 Aed-Chr1 19479514 19480155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2344 4 212 Nodulin-like Gene Family AT3G43660 66.029 2.04e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2344 K22736 - gmx:100814343 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0708 7 5252413 5253096 Aed1g2344 1 19479514 19480155 PCT