Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2343 ATGGAGCATAACTTCGCCGAAGCATCGCCGGACACGGCGGCGATTGATCAGCTTCTGGCCGAGGATCCTGCGTTGCACCTCCAGGACCCATTCTCCGGCAACTCCTTCTCTGTCTTCGACAACTTCGAGGATCTGCTCGAACTTGATTTCACAACCTTTGATTTCGACATGCTGAATTTGAACTCCCTACCACCTACGCCGCCTCCGCCGACTACCGCCACCGTGGTGACCGTCGATTCGATTTCATCCGAGGATTCAAACGCGCGGGCCTCGGGGCCCGGGCCGGTAGTGCCCACGGCGGGACTGGAGCGCGGCAAATCCGTGGTCTCCAGCGAGATCGGCGGCGGAGGAGAGAAGTTAAAGCGGCGCCGCCGGACAAGCTTTACCGTGGCGGCGTGCGGGCCAGTGATTTGTCAGGGGAATAGAGGCATGAACCCTGAGCAGCTCGCTGAACTTGCTAGGGTTGATCCCAAGAGGGTTAAGAGGATTATTGGCAATAGAAAATCTGCTGCTAAATCAAAGGCAAGAAAAACAAAATATGAAAAAGAGTTGGAGGAAAAGGTCCCGCAGCTTAAGATTCAAGCAGCTAGACTAGCTGCTAGTGTTAGCATGCATCAGAGAAACGGTCCAAAATTGGATGTTCGTGGTAAGGAGCTCTCAATAACCAGGGACGCTGTGCTACAAAGAGTACTGATGAAAGATGCTATCGTTACTGGGGTAAAGGAAGAATATCGAATCTTTAATATTGGCAGTGATAATATTAATATGTTGTTAAGTTTATCTGACGAAGAGTTTGTCGCTCACTTCTCTTCCAAATCTGATCAGCAAACACAGCTCTCCATGCCTAATCCTCATCAGCTTCCTTCCTCTGGGAAATATCCCTAA 885 0.5073 MEHNFAEASPDTAAIDQLLAEDPALHLQDPFSGNSFSVFDNFEDLLELDFTTFDFDMLNLNSLPPTPPPPTTATVVTVDSISSEDSNARASGPGPVVPTAGLERGKSVVSSEIGGGGEKLKRRRRTSFTVAACGPVICQGNRGMNPEQLAELARVDPKRVKRIIGNRKSAAKSKARKTKYEKELEEKVPQLKIQAARLAASVSMHQRNGPKLDVRGKELSITRDAVLQRVLMKDAIVTGVKEEYRIFNIGSDNINMLLSLSDEEFVAHFSSKSDQQTQLSMPNPHQLPSSGKYP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2343 294 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 156 219 IPR004827 GO:0003700|GO:0006355
Aed1g2343 294 SMART brlzneu 154 218 IPR004827 GO:0003700|GO:0006355
Aed1g2343 294 Gene3D - 157 208 - -
Aed1g2343 294 CDD bZIP_plant_RF2 159 208 IPR044759 GO:0003700|GO:0006355
Aed1g2343 294 Pfam Basic region leucine zipper 156 205 IPR004827 GO:0003700|GO:0006355
Aed1g2343 294 SUPERFAMILY Leucine zipper domain 158 207 IPR046347 GO:0003700|GO:0006355
Aed1g2343 294 MobiDBLite consensus disorder prediction 271 294 - -
Aed1g2343 294 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 46 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2343 Aed-Chr1 19468482 19471141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2343 127 292 bZIP Transcription Factor Family AT1G43700 33.735 2.16e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g2343 bZIP_2 1e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2343 - K20557 gmx:102664725 210.305