Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2319 ATGGAACAGAAACACGTGCTCTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGACTTGGATTGAGCACAGGACAAGCTATTCAAAAATGGGTTGGAGGGAGTTGTGACTCTGATGAGATTTCTGAGGAGCAGATTGTGTTGGAGCTCAACAACAGAGTTATTGATGGGAAGAACATCGAAATCACATTTGATAAGTTTCCTTATTACTTAAGTGAAAGAATCCAAATTTTGTTAACAAGTACCGGATATGTTTATTTAAAACAAGACTTTTCCAAGCACTTGAGGAACCTTCGTCCATCAAGCAGAGCTATTTTGCTTTCTGGACCTGCAGAACCTTATCAGCAAAATCTTGCCCGAGCTTTAGCACATTACTTTGAATCGAAGTTACTGTTGCTAGACATTGCTGACTTCTCGTTGGAGATGCAGAGGAAATACGGATGTCCCAGAAAAGAACCATGTTTTAAAAGGTCCATATCTGAGGTGACTTTGGAGCGAGTATCTGGTTTGTTTGGTTCCTTGTCAGTCCTTCCTTCAACAGGCAGAACTAGAGGTACACTACATCGACAGAGTAGTGGAATTGAAAAGTCAAGCAATCCTCCAAAGCTTCGTAGGAATGCCTCTACTGCATGTGAATATGATCCATCAGACCCAGGTCCTTTGAAGGGCACAAGTGGCTTCTGTTTTGATGAAAAGCTCTTCGTGCAGTCACTTTATAAGGTCTTGGTTTCTATCTCAGAAACCAGTTCCGCTATTTTATACATCAAGGATGTTGAGAAGCTCTTTGTTCGATCAACAAGGCTACACAATTTGTTCCAAAAGTTAATAAACAAACTTTCAGGATCAGTGTTAATACTTGGTTCCCGGATCTTTGATTCTGAAGATGATTGTATAGAAATTGATGAAAAGCTTACTATGTTATTCCCTTACAACATTGATATCGAACCACCTCACAATGAGACCGATCTTGAAAGCTGGAAAACCAAACTGAAAAAGGACATGGAAACAAGTCTGTTTCAAGATAGCAGGAACCACATTGCTGAAGTACTTGCAGCAAATGACATTGATTGTGATGAATTGGAAAAAGTCGACCACGCCAACACTATGCTACTCAGTAATTGCATTGAAGAGATTGTGGCGTCTGCAGTTTCTCACCACCTGATGGAGACTAAACCAGAGTACCGAAATGGAAAACTAGTTATATCACACAAGAGTTTGTCACATGTATTGAATCTTGTCCAGGAAAGTGAAAGTAATCCGGAGAATAAAGATTCAAACAAGGAGGATGCCCCTGCAACAAAGAAAGATGGTGACAACAATGCTCCGGACAATGAGTTTGAGAAGCGCATGAGAGCAGAGGTTGTGCCTGCAAATGAGATAGGGGTTACATTTGAAGATATTGGTGCATTGGATGACATTAAAGAATTACTTCAAGATGTGGTCTTGCTTCCCCTCAGAAGACCAGACATATTCAAAGGTGGGCTTTTGAAGCCTTATAAAGGAATATTGCTTTTTGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATCTCTAACATCACTTCAAAGTGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCAAAGGTTGCTCCAACTATTATTTTTATTGATGAGGTTGATAGCATGCTTGGTCAGAGGACTAAATATGGAGAGCATGAGGCAATGAGAAAGATTAAAAATGAATTCATGGCCCACTGGGATGGGCTATTGTCAAAACCTGGAGAGCGAATTCTGGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAGCGCAGGATCATGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCTTGAAAACTCTCCTAGCTAAGGAAAAATATGAAAATATAGACTTTAAAGAGCTTTCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCACGGCTGCTGCTTATCGACCTGTCAAAGAGCTACTTCAACAGGAGAGGTTGAAGGAAAAGGAAAAGAAGAAAACAGAGGCAGAAGTTCAAAGATCGGAAGATTCTTCTGATGCTAAAGGAGATAAAGAAGACGGAGCGATTGCTTCAAGGTGTTTAAACATAGAAGACACAACACACGTGAGTCAGGAAAAGAAGAAAACAGAGGCAGAAGTTCAAAGCTCAGAAAGTGCTTCTGATGCAAAAAGTGATATAGATGACCAAGTGGTTACTGCTTCTGATGCAAAAAGTGGTAAAGATGACCAAGTGATTACTTTGAGGCCTTTAAACATGGAAGACATGAGGCAGTCAAAGAGTCAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCAATAATGAGCGAGTTGAAGGAGTGGAATGAGTTGTTTGGAGAAGGAGGTTCAAGGAAGAAGCAGCAGCAGCAGCTAACTTACTTCCTTTAG 2508 0.4103 MEQKHVLLSALSVGVGLGVGLGLSTGQAIQKWVGGSCDSDEISEEQIVLELNNRVIDGKNIEITFDKFPYYLSERIQILLTSTGYVYLKQDFSKHLRNLRPSSRAILLSGPAEPYQQNLARALAHYFESKLLLLDIADFSLEMQRKYGCPRKEPCFKRSISEVTLERVSGLFGSLSVLPSTGRTRGTLHRQSSGIEKSSNPPKLRRNASTACEYDPSDPGPLKGTSGFCFDEKLFVQSLYKVLVSISETSSAILYIKDVEKLFVRSTRLHNLFQKLINKLSGSVLILGSRIFDSEDDCIEIDEKLTMLFPYNIDIEPPHNETDLESWKTKLKKDMETSLFQDSRNHIAEVLAANDIDCDELEKVDHANTMLLSNCIEEIVASAVSHHLMETKPEYRNGKLVISHKSLSHVLNLVQESESNPENKDSNKEDAPATKKDGDNNAPDNEFEKRMRAEVVPANEIGVTFEDIGALDDIKELLQDVVLLPLRRPDIFKGGLLKPYKGILLFGPPGTGKTMLAKAIANEAGASFINVSISNITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRTKYGEHEAMRKIKNEFMAHWDGLLSKPGERILVLAATNRPFDLDEAIIRRFQRRIMVGLPSAENREMILKTLLAKEKYENIDFKELSTMTEGYTGSDLKNLCTAAAYRPVKELLQQERLKEKEKKKTEAEVQRSEDSSDAKGDKEDGAIASRCLNIEDTTHVSQEKKKTEAEVQSSESASDAKSDIDDQVVTASDAKSGKDDQVITLRPLNMEDMRQSKSQVAASFAAEGSIMSELKEWNELFGEGGSRKKQQQQLTYFL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2319 835 MobiDBLite consensus disorder prediction 734 749 - -
Aed1g2319 835 CDD AAA 497 634 - -
Aed1g2319 835 MobiDBLite consensus disorder prediction 693 779 - -
Aed1g2319 835 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 438 736 - -
Aed1g2319 835 Coils Coil 685 705 - -
Aed1g2319 835 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 438 736 - -
Aed1g2319 835 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 431 - -
Aed1g2319 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 462 683 IPR027417 -
Aed1g2319 835 MobiDBLite consensus disorder prediction 693 726 - -
Aed1g2319 835 ProSitePatterns AAA-protein family signature. 606 625 IPR003960 GO:0005524|GO:0016887
Aed1g2319 835 MobiDBLite consensus disorder prediction 421 445 - -
Aed1g2319 835 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 740 835 - -
Aed1g2319 835 Pfam AAA+ lid domain 655 691 IPR041569 -
Aed1g2319 835 SMART AAA_5 499 636 IPR003593 -
Aed1g2319 835 MobiDBLite consensus disorder prediction 415 445 - -
Aed1g2319 835 MobiDBLite consensus disorder prediction 183 206 - -
Aed1g2319 835 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 740 835 - -
Aed1g2319 835 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 431 - -
Aed1g2319 835 Gene3D - 635 708 - -
Aed1g2319 835 MobiDBLite consensus disorder prediction 183 218 - -
Aed1g2319 835 Pfam ATPase family associated with various cellular activities (AAA) 503 633 IPR003959 GO:0005524|GO:0016887
Aed1g2319 835 Gene3D - 462 634 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2319 Aed-Chr1 19210460 19217885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2319 463 710 Calmodulin-binding Proteins AT3G56690 38.492 1.77e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2319 - - gmx:100793760 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0675 7 4968780 4979960 Aed1g2319 1 19210460 19217885 PCT