Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2293 ATGTCGTCGCCGAGGTTCCCAGGTGGTGGAGCCTCCGATTTCTACGGTGGAGCAGGAGAATTTCCTAGTCAATCCACGGCGGTTCAACCCACCATGAACCACCACCCCGCCACCACACACAACCCTCTATACCGATCCCAGTCTTCAATTTTGCTTAACCCCTCGTCCCACATCGCCCAACACCACCAAACGTCCACTCTCATCGGGAAACGCACCCTCGCCGAATTCCAAACCCACAACCTTAACAACAACAACTCACTCCTTTCAAACTATCTACTTCGCTCTGTGAAACCCAGAAGTTTCCAACACACTGATTTCTCGACGTCCACTCATGAATTATCCACCCTTCCGTCACAGCGTTACGGCCTACCCCTTCTCCACCACCTTCGCCCTAACGCCGTTACGAATTCGATCCTCGCCAATTCAAGTTTTCCTCCGGTTCACAGCAGACTAACCGCACCAGAGAAGAACTCAATAGACCGCCGCCTCCAGGAGTTGGAAAAGCAGCTTCTAGAAGACAATGAAGAAGACGAACAAGGCGATGCCGTTTCGGTCATTACCAGCACCACTTCCGAATGGTCTCACACAAACACTATACAAAACTTAATCACCCCACACAAACCCGCTTCGACGTCGTCTCCCACTTCCTCTACGACGTCGTCTAACACCTCCGTAGAATCGATCAGTTCCAAACAGTCCCTAACGGAGGCCGCAAACGCGATTTCAGAAGGGAGGTTCGATGCCGCAACGGAGATCCTAACCCGATTGTCGCAGAATTCGGATCAACGCTTCGTGAATTGCATGGTTTCGGCGCTCAAGTCGCGGATGAATCACGCTGAGTATCCACCACCGGTTGCGGAATTGTTCGGCCCAGAACACGCCAAGTCGACTCAGTTGCTCTTCGAGCACTCGCTCTTCTTCAAGGTCGCGCGCATGGTCGCCAACATCGCAATCCTCGAATCCGCATTAACCGAGAACGCGAAGCTGTGCGTGGTGGATTTCGATATCGGTGACGGGAACCAATATGTGAGCCTTCTCCACGAGCTTTCCGCGCGGCGTAAGGGCGCTCCGGCCGCCGTGAAGATCGTCGCGGTGGCGGAGAACTCCGACGACGAGAGGCTGAATACCGTGGGCGTGTTGCTGCAGAGACAGGCAGAGAAACTAGGGATTGGTTTCGAATTCAAAGTGCTGACTCGGAGAATAACCGAGTTGACTCGCGAATCGCTGGGTTGCGACGCGGACGATGCGCTGGCGGTGAACTTTGCGTATAAGCTTTATAAAATGGCTGACGAGAGCGTCTCCACGGAGAACCCGCGCGACGAGCTTCTGAGGCGCGTGAAGGCACTCGTGCCGCGCGTGGTGACGCTGGTGGAGCAGGAGGCTAATACCAACACGGCGCCGTTCGTGGCTCGCGTGTCCGAGTTGTGTGCGTATTACGGCGCGCTCTTTGACTCGCTCGAGTCGACGATGTCGCGGGAGAACTCGGAGCGAGTTAAGATCGAGGAGGGGCTGAGTCGGAAGGTGGGGAACTCGGTGGCGTGCGAAGGAGGGGACCGTGTGGAGCGGTGCGAGGTGTTTGGGAAGTGGCGCGCGCGTATGAGCATGGCTGGGTTCAGGCTGAAACCACTGAGTCAGCGAGTCGCTGAGTCAATCAGAGCGCGACTCGGTGGTGCTGGGAACCGAGTCGCGGTAAAAGTAGAGAACGGTGGGATTTGCTTTGGCTGGATGGGAAGAACTCTCACTGTCGCATCTGCTTGGTGTTAA 1764 0.5567 MSSPRFPGGGASDFYGGAGEFPSQSTAVQPTMNHHPATTHNPLYRSQSSILLNPSSHIAQHHQTSTLIGKRTLAEFQTHNLNNNNSLLSNYLLRSVKPRSFQHTDFSTSTHELSTLPSQRYGLPLLHHLRPNAVTNSILANSSFPPVHSRLTAPEKNSIDRRLQELEKQLLEDNEEDEQGDAVSVITSTTSEWSHTNTIQNLITPHKPASTSSPTSSTTSSNTSVESISSKQSLTEAANAISEGRFDAATEILTRLSQNSDQRFVNCMVSALKSRMNHAEYPPPVAELFGPEHAKSTQLLFEHSLFFKVARMVANIAILESALTENAKLCVVDFDIGDGNQYVSLLHELSARRKGAPAAVKIVAVAENSDDERLNTVGVLLQRQAEKLGIGFEFKVLTRRITELTRESLGCDADDALAVNFAYKLYKMADESVSTENPRDELLRRVKALVPRVVTLVEQEANTNTAPFVARVSELCAYYGALFDSLESTMSRENSERVKIEEGLSRKVGNSVACEGGDRVERCEVFGKWRARMSMAGFRLKPLSQRVAESIRARLGGAGNRVAVKVENGGICFGWMGRTLTVASAWC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2293 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 587 IPR005202 -
Aed1g2293 587 ProSiteProfiles GRAS family profile. 221 587 IPR005202 -
Aed1g2293 587 MobiDBLite consensus disorder prediction 1 41 - -
Aed1g2293 587 Coils Coil 156 176 - -
Aed1g2293 587 MobiDBLite consensus disorder prediction 203 232 - -
Aed1g2293 587 MobiDBLite consensus disorder prediction 22 41 - -
Aed1g2293 587 Pfam GRAS domain family 231 586 IPR005202 -
Aed1g2293 587 PANTHER SCARECROW-LIKE PROTEIN 8 62 587 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2293 Aed-Chr1 19059406 19061169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2293 14 586 GRAS Transcription Factor Family AT5G52510 45.679 1.80e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed1g2293 GRAS 1.7e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2293 - - gmx:100800097 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2293 1 19059406 19061169 Aed1g2293 1 19059406 19061169 ECH
Aed7g0623 7 4637781 4639730 Aed1g2293 1 19059406 19061169 PCT