Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2274 ATGAACATCGTGGTGGCTTTCGCATTCTTGCATCTAGCCACAGTGGCATCATTGCGTGTGCTATCAGAACAGAGGCTTCTCGTGGCATTTGGAGCTGGTCAACACAATTTGAGTGATCTGACATCATGCTTGGAGAGAGCCAAAACTCGGAGGGGTTCAACACTTTACATGAACTCCGGTATTTTAAGCAATAATGCCACCCTTAATCCAGACATCAACACTTTATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCGCGACCTTCTACCACAAGGTTTGGGAAATGCACGGATGGTAATACTCCACACCTCTTTGGACTTTGCTTTCATTTATTCTTTCAAGTCTCAACATTGCATGAATTTAAGTCAACAACTTATCCAATCATGAATTCAGAGTACCAATTCCGTCATATATTAGCGCCACCCTCTGCTGATATGCACGGACGTTGGAACGGTTGCAAGAAGAACCCAGCGGCATGCACACCAGACCAAATTAATACATTGCAAGGTTTTAGGCTTGACATGCTTGCGGCTTTGAAACCGTTCTATATGAATTCAAGAGGAGGGGGGATATTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACTGCAAGAAACATGGTTTAGGGATGATTCTCCAAGAATAAACCAATCTCACTCCTTCACAGCGAGGCATGATGATAAACCTACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGGAACATAAGCAAGGAAATAGACTGTGCATATCCTTGTGATGCAACTTGTCATAATCTTATACCGTAA 798 0.4211 MNIVVAFAFLHLATVASLRVLSEQRLLVAFGAGQHNLSDLTSCLERAKTRRGSTLYMNSGILSNNATLNPDINTLFQRAKDLGSHYSRPSTTRFGKCTDGNTPHLFGLCFHLFFQVSTLHEFKSTTYPIMNSEYQFRHILAPPSADMHGRWNGCKKNPAACTPDQINTLQGFRLDMLAALKPFYMNSRGGGIFINSCFAHCQSELQETWFRDDSPRINQSHSFTARHDDKPTIAEAVGDWYFSRNISKEIDCAYPCDATCHNLIP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2274 265 PANTHER NOTUM-RELATED 120 265 IPR004963 GO:0016787
Aed1g2274 265 PANTHER NOTUM-RELATED 26 83 IPR004963 GO:0016787
Aed1g2274 265 PANTHER PECTIN ACETYLESTERASE 9 120 265 - -
Aed1g2274 265 PANTHER PECTIN ACETYLESTERASE 9 26 83 - -
Aed1g2274 265 Pfam Pectinacetylesterase 129 245 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2274 Aed-Chr1 18905212 18907813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2274 29 72 Carbohydrate Esterase AT5G23870 49.153 3.37e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2274 K19882 - gmx:100794453 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2274 1 18905212 18907813 Aed1g2274 1 18905212 18907813 ECH