Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2273 ATGAATCTCGTCGCGGCGTTTGCCTTATTATTGTGTCTATTCACGGCGGTGCCATGGCGCGTTCTCTCGCAACAACAACAGAGGCTTCTCGTGAACATGACGCTCGTTCCGAACGCTCGTGCTAGCGGCGCTCTTTGTTTGGACGGAAGTTTACCGGCGTATCACTTGCACAGAGGATTTGGAGCTGGTCAAGACAACTGGCTTCTACAATTTGAGGGAGGTGGATGGTGCAATGACTTGAAATCATGCTTGGTGAGAGCCAATACTCGGAGGGGTTCAACACGTTATATGACCAAGTGGGAGGTGTTCTCTGGTATTTTAAGCAATAATGCTACCCTCAATCCAGATTTTTATAATTGGAACCGTGTGAAGCTGAGATACTGTGATGGAGCTTCATTCACCGGAGACGCTGTGTTCACTAACAAGACAACAACACTTCATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCGTGACCTTTTACCACAAGGTTTAGGAGAGGCACGAAAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCAACCTTTCACCATTGTGACAACTTTGCCAAGAATTTGCCTACGAATACTAGTGTTAAATGTCTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGATATCAGTTTGAATCACACTATGAGGTATTTTGTCAAAAGTCTAGTTCAATTGCAGGGGATAGAGAAGAACCTGAATAGAAATTGTACCAAAGCACTATACTTTCCAGACTTGTGTTTCTTTCCACAATATGCGTTGAGATACATATCAACACCATATTTTATCTTGAACTCTGCCTACGATGTATTCCAGTTCCATAATATATTGGCGCCATCCTCTGCTGATATGCACGGACAATGGAACCACTGCAAGGTGAACCCGACAGAGTGTACAACAGACCAAATTGATACATTGCAAGAAGCGGTTGGTGATTGGTATTTTAGTAGGAACATAAGCAAGGAAATAGACTGTGCATATCCTTGTGATGCAACTTGTCATAATCTTATACCGTAA 1035 0.4329 MNLVAAFALLLCLFTAVPWRVLSQQQQRLLVNMTLVPNARASGALCLDGSLPAYHLHRGFGAGQDNWLLQFEGGGWCNDLKSCLVRANTRRGSTRYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFTNKTTTLHFKGQKIWEAIIRDLLPQGLGEARKALLSGCSAGGLATFHHCDNFAKNLPTNTSVKCLSDAGFFLDERDISLNHTMRYFVKSLVQLQGIEKNLNRNCTKALYFPDLCFFPQYALRYISTPYFILNSAYDVFQFHNILAPSSADMHGQWNHCKVNPTECTTDQIDTLQEAVGDWYFSRNISKEIDCAYPCDATCHNLIP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2273 344 PANTHER PECTIN ACETYLESTERASE 9 311 344 - -
Aed1g2273 344 PANTHER PECTIN ACETYLESTERASE 9 23 314 - -
Aed1g2273 344 Pfam Pectinacetylesterase 24 314 IPR004963 GO:0016787
Aed1g2273 344 PANTHER NOTUM-RELATED 23 314 IPR004963 GO:0016787
Aed1g2273 344 PANTHER NOTUM-RELATED 311 344 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2273 Aed-Chr1 18894177 18902137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2273 1 344 Carbohydrate Esterase AT5G23870 56.140 1.88e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2273 K19882 - gmx:100802358 625.165