Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2254 ATGGCGTTGGGTGTGCCTGCTCTTCCCCTGACATACGTGGCTCACGTTCTGGCGGTTGTTGCCAGCGTCTTGGTGGTGGTCTGGGTCGTCAATTTCAGAGGTGGCTTGGCTTGGGATTCTGATAACAAGGCCCTCATCTTCAATATTCATCCAGTTCTCATAGTTATTGGCTTACTAGTTCATGGAGGTGAAGCTATTATAAGTTACAAAGCTTTGCCCTTGAAGAAGGAAGTGAAGAAACTGATACACCTTGTTTTCCACGCCATCGCATTGATACTTGGAATAGTTGGAATTTACACTGCTTTCAAGTATCACAACGAAAGTGGGATTGCCAATCTCTACAGCTTGCATTCATGGCTTGGAATTGGAGTTATTGTCCTTTATGGCATTCAGTGGATATATGGTTTTGTGATATTTTTCTTCCCTGGTGGGACTCCTGACATTAGACGTGCCTCGCTTCCTTGGCATGCACTCTTTGGTCTGTTTGTGTTTGTGTTGGCTGTGGGAACTGCTGCTCTTGGGTTTCTGGAGAAGCTCACTTTCCTTGAGAGCTCAGGAGTGGAGAAATATGGTTCTGAGGCTTTGCTTGTGAACTTCACTGCTATTATCACAGTCTTATTTGGTGCCTTTGTTGTGTTATCTGCTATAGCTGATGCTCCCCCAGCCCCAGCAGCAGATGACTATGAAGCCATATAG 696 0.4569 MALGVPALPLTYVAHVLAVVASVLVVVWVVNFRGGLAWDSDNKALIFNIHPVLIVIGLLVHGGEAIISYKALPLKKEVKKLIHLVFHAIALILGIVGIYTAFKYHNESGIANLYSLHSWLGIGVIVLYGIQWIYGFVIFFFPGGTPDIRRASLPWHALFGLFVFVLAVGTAALGFLEKLTFLESSGVEKYGSEALLVNFTAIITVLFGAFVVLSAIADAPPAPAADDYEAI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2254 231 CDD Cyt_b561_ACYB-1_like 40 183 - -
Aed1g2254 231 Gene3D - 3 220 - -
Aed1g2254 231 PANTHER CYTOCHROME B561-RELATED 1 227 IPR043205 GO:0016491
Aed1g2254 231 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Aed1g2254 231 SMART 561_7 49 175 IPR006593 -
Aed1g2254 231 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 227 - -
Aed1g2254 231 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2254 Aed-Chr1 18734276 18737490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2254 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 67.431 2.27e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2254 K08360 - gmx:100527259 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2254 1 18734276 18737490 Aed1g2254 1 18734276 18737490 ECH