Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2239 ATGGGAAGGAAGTTTCGCGAGAAAATAGAGGGATTCAGAAAAGTTGTACCTGACCGCTGGGAATTCTTGAACGAGTATTTCCGAAGAGGCGAGAAGCGTCTTCTCTGCGAAATCCAGCGACGGAAGATCATCTCGGCAACGCCGCCGACCGGAGCAACTACGACCGTGGCGGTTCCGTCGCCGCTATCTGCGAAGCCGATCGTATCGCCGTCGAACTCAGCGGAGGAGCAGGTGACTTCGTCGAACTCGTCGCCGGCGGAGCTGTTGGACGAGAACGAGCGGCTGAGGAAGGAGAACATTCTGTTGACGAAGGAACTGGAGGAGATGAGATCTCTATGCAACAATATATTCAATCTCATGTCGAAATACACAAACGCTCAAGCGGATGGCGGTTCTGTGGCGGAGGCAAATACGCTTCGTTTGATGCCGGCGAAGCGGTCCTCCGGAGAGGATGCGGTGGAGGAGATGAATCCGAAGCTGTTTGGGGTGGCGATTGGTACGAAGCGAGCAAGAGAGGAAGGACAGTATGATACGGTTTTGAGTCTGGATCAGCCGTTCCAGGCTGGCGTGAAATCTGAACCGTTGGATTTCGCAAGACATGGCGAGAATAAAAAAACGCCGTGGCTAAATCTATGTCATAGAGAAAATCAGAGAGTGTGTAATTGA 666 0.524 MGRKFREKIEGFRKVVPDRWEFLNEYFRRGEKRLLCEIQRRKIISATPPTGATTTVAVPSPLSAKPIVSPSNSAEEQVTSSNSSPAELLDENERLRKENILLTKELEEMRSLCNNIFNLMSKYTNAQADGGSVAEANTLRLMPAKRSSGEDAVEEMNPKLFGVAIGTKRAREEGQYDTVLSLDQPFQAGVKSEPLDFARHGENKKTPWLNLCHRENQRVCN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2239 221 Coils Coil 92 112 - -
Aed1g2239 221 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 11 205 - -
Aed1g2239 221 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 205 IPR027725 -
Aed1g2239 221 MobiDBLite consensus disorder prediction 50 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2239 Aed-Chr1 18651623 18653816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2239 11 221 HSF AT5G62020 43.802 9.29e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2239 K09419 - gmx:100780987 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2239 1 18651623 18653816 Aed1g2239 1 18651623 18653816 ECH
Aed7g0548 7 4038975 4040783 Aed1g2239 1 18651623 18653816 PCT