Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2232 ATGGGCTTTCTCCGGCGACTTTTCGGCGCCAAAAAATCCTCCGATTCCAAATCCGGCAAGAAAAGATGGACCTTCCTCAAACACACCGTCAGGAACAAGTCACTCCCGCCACCGCCACCCTCCGCTTTCAACACCCAATTTGATTGTTCAACTCCATTGGACGCCAACAAGCATGCCATTGCCGTCGCCGCTGCCACCGCCGCCGTAGCAGAAGCCGCTCTAGCCGCCGCCCATGCTGCCGCCGAGGTCGTCAGACTCACAAGTGGCGGTGTCGCCGCCGCTACAAGTACCAGCACCAGACCCGCCGTGACGACGGCGCGTGTTGGAAACTTTGAGCCCGCCGCCGTTAAGATACAATCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCGCTAAAAGCATTGGTGAAGTTGCAAGCATTGGTAAGGGGCCACATTGTGAGAAAGCAAAGTGCTGATATGCTCAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGCCGTGCGCACTTCCACTTGTCAGATACTCATACTACTACTTTTTTCAACTCTTCCCTTTCTCACTATCCTATTCCTGTCCCTGAAGAATATGACCACCCATCTCGTGGCTTTAGTACAAAATTTGATGGATCCTCTATCCTTAAAAGATGTAGCTCCAATGCCAATTCTAGGAATGTTGACTCAGAACGAGCCCGATTTGACTCCAACTGGTTAAACCGTTGGATGGAATTAGACAACAAGTGCAGCCAAACTGGAGATGCTTCATTGAAAAATGGACGCCATGATGATGATAATAAAACGGACAAGATTCTCGAAGTGGATACTTGGAGGCCACACTTCAATTCTCACCACAATAGCAGCTCCTTTCAAGCAGCAGCACATTATTATTTGAGTTCTTCTGATTACAACAATGAGTCTCCATCAAAACGTTCAGCAAAGGCTCTAAACCAAAGCTTCTCATCAAGGGAGGTGTTGCAGCTAAGTTCATTGAAGTTTCACAAAGGGAAAGAAGAAGCAAGCTCAAGAACTGCTGACAATAGTCCACAAGCATTTTCTGCCAATTCTAGAAATGGAAGTGGTGCAAGAAGAGGAGGACCCTTTACACCTACAAGGAGTGAGTGTTCGTGGGGCTTCTTCAGTGGCTACACGGGTCACCCCAATTACATGGCCAACACTGAATCTTTTAGAGCTAAGGTCAGATCACAAAGTGCACCAAGACAAAGGTTGGAGTTTGACAGATACGGTTCCACTAGGAGGCATGTTCATGTGGTGGAGCCTAATTCAGACCAGGATTCAGATTTAAATTTAAGGAACAAAATCTTACCTGCCTCTAACCAAATGAACATAATTGGGAGTAGCAATTTAAGGTGA 1389 0.4809 MGFLRRLFGAKKSSDSKSGKKRWTFLKHTVRNKSLPPPPPSAFNTQFDCSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVAAATSTSTRPAVTTARVGNFEPAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHFHLSDTHTTTFFNSSLSHYPIPVPEEYDHPSRGFSTKFDGSSILKRCSSNANSRNVDSERARFDSNWLNRWMELDNKCSQTGDASLKNGRHDDDNKTDKILEVDTWRPHFNSHHNSSSFQAAAHYYLSSSDYNNESPSKRSAKALNQSFSSREVLQLSSLKFHKGKEEASSRTADNSPQAFSANSRNGSGARRGGPFTPTRSECSWGFFSGYTGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRHVHVVEPNSDQDSDLNLRNKILPASNQMNIIGSSNLR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2232 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 156 IPR027417 -
Aed1g2232 462 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Aed1g2232 462 MobiDBLite consensus disorder prediction 348 367 - -
Aed1g2232 462 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Aed1g2232 462 PANTHER CALMODULIN-BINDING PROTEIN 1 460 - -
Aed1g2232 462 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Aed1g2232 462 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Aed1g2232 462 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Aed1g2232 462 MobiDBLite consensus disorder prediction 339 374 - -
Aed1g2232 462 Gene3D - 110 163 - -
Aed1g2232 462 SMART iq_5 110 132 IPR000048 GO:0005515
Aed1g2232 462 SMART iq_5 133 154 IPR000048 GO:0005515
Aed1g2232 462 Pfam Protein of unknown function (DUF4005) 353 426 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2232 Aed-Chr1 18599076 18603668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2232 1 417 IQD Protein Family AT5G62070 44.240 5.17e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2232 - - gmx:100783694 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2232 1 18599076 18603668 Aed1g2232 1 18599076 18603668 ECH