Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2215 ATGGAAGCGAATCCCAGCCACGACGGCGATGACACATCGGAGACGCCGCCGCCGCCAATGGTGGACCCGACAGAGTCTCCATCTTCTTCTCCGCCGTCGCAAATGAAAGAAGAGCTGACGGATACGGAGCAAGGCGGTGACGTGTCCCTCCCGGTGAGCGTGATTCCGGCGCCGCTGACGGTGTCGAAGGCGGCGGCGAAGCGGCCGTCGAAGGACCGGCACACGAAGGTGGAGGGACGCGGCCGTAGAGTCCGTATGCCGGCGACTAGCGCGGCGAGGATCTTCCAGCTGACGCGGGAGCTGGGACACAAGTCCGACGGAGAAACAATCCGGTGGTTGCTGGAGCATGCTGAGGCGGCGATCATGGAGGCTACCGGCACCGGCACCATCCCGGCGATCGCGGTCTCGGTCGGAGGCACCCTCAAGATTCCGACATCCTCAGCAGCAAGACCCGAGGGAGAGGATGCGCCGAAAAAGCGAAGGAGAAGAGCATCAAACAGCGAATTCATCGACGTGAACCAGAACGAGAACGAAAAGCAGGTTTCGGTGTCTTCAGGGCTGGCACCAATCGCGCAAAGCGCGTATGGAGGTGTTGCCAATGTTCCTCTGTGGCATGGTAGTAACGCTTCGGGGCCTTTCTTCATGTTTCCAAACGCTTCAAACCCGCCTCATTATTGGGCCATTCCCGCAACCGCGGCCCCGTTTTTAAGCGTCCAGGCCCGGCCCATTCCGGGGTTCGTTTCCGCCTTGCAGATGCAACATGATAACATTAACATTAACCACCACTCTTCAAACGGTGTTGCTAACTCTTCGTCCACTACCATGAGCTCAGTGAGTGTCACTACTAGTGCTGGTTCCGCTGCTACGACCACTCAAATGCTCACGGATTTCTCTTTGGAGCTTTATGACAAGAAAGAACTTCAATTTTTGGGTCAACCATCACCCTCTTCAAAGCCTTGA 960 0.574 MEANPSHDGDDTSETPPPPMVDPTESPSSSPPSQMKEELTDTEQGGDVSLPVSVIPAPLTVSKAAAKRPSKDRHTKVEGRGRRVRMPATSAARIFQLTRELGHKSDGETIRWLLEHAEAAIMEATGTGTIPAIAVSVGGTLKIPTSSAARPEGEDAPKKRRRRASNSEFIDVNQNENEKQVSVSSGLAPIAQSAYGGVANVPLWHGSNASGPFFMFPNASNPPHYWAIPATAAPFLSVQARPIPGFVSALQMQHDNININHHSSNGVANSSSTTMSSVSVTTSAGSAATTTQMLTDFSLELYDKKELQFLGQPSPSSKP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2215 319 MobiDBLite consensus disorder prediction 66 82 - -
Aed1g2215 319 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 316 IPR005333 GO:0003700
Aed1g2215 319 MobiDBLite consensus disorder prediction 152 167 - -
Aed1g2215 319 MobiDBLite consensus disorder prediction 63 82 - -
Aed1g2215 319 MobiDBLite consensus disorder prediction 143 177 - -
Aed1g2215 319 MobiDBLite consensus disorder prediction 1 54 - -
Aed1g2215 319 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Aed1g2215 319 Pfam TCP family transcription factor 70 181 IPR017887 -
Aed1g2215 319 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 10 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2215 Aed-Chr1 18463824 18464783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2215 62 310 TCP Transcription Factor Family AT5G51910 53.232 8.05e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed1g2215 TCP 8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2215 - - gmx:100819475 471.47