Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2214 ATGCATCTTTTCATGAAGTTCTCATCCAAGCCTCATTTTCAAAGTACAACAATTCTGATTTATCAGATGGCCCCTCTGCGAGCTGAAAACATCTTTCCAATCATTTTCCTCCTCTTGACAATACTTCCACTATCCAGAGCTGAACTTCATGCTCATTACTACCACCAAACATGTCCACAAGTGGAAAAAATAATTTCAGAGACTGTTCTCAAGGCTTCTAAGCATGACCCAAAAGTCCCAGCCCGTATCTTGAGAATGTTATTCCATGACTGTTTCATAAGGTCTGGAGGTCCACATTGGAATGCACTAAAAGGGAGGAAAGATGGAAAAGTATCAAAGGCATCTGATACCATCAACTTACCCGCTCCAACCTCCAATGTGAGCCAACTAATTCAGAGCTTTGCTAAGAGAGGCTTGACAGTTAAAGATTTAGTAACTTTATCTGGAGGTCACACTCTAGGCTTTTCACATTGTTCTTCCTTTGAGGCACGTCTTCGTAATTTTAGTTCATTGCATGACACTGATCCAAGTATGAACACCAAGTTTGCTTTAGACCTAAGAAAGAAATGTCCAAAACCAAACCACAATCGCAACGCAGGACAGTTCCTGGACTCAACAGCATCAGTGTTTGACAATGACTATTATAAACAACTGTTGGCTGGAAAAGGTGTGTTTTTTTCAGATCGATCACTTGTTGGTGATCACAGGACTAGATGGTTTGTTGAGGCATTTGCGAAAGACCAGGGTTTGTTCTTCAAAGAGTTTACAGCTTCAATGTTGAAACTTGGAAATTTAAGAGGCTCTAAAGTTGGAGAAGTGAGACTTAATTGCAGGATTGCGAATTGA 846 0.4043 MHLFMKFSSKPHFQSTTILIYQMAPLRAENIFPIIFLLLTILPLSRAELHAHYYHQTCPQVEKIISETVLKASKHDPKVPARILRMLFHDCFIRSGGPHWNALKGRKDGKVSKASDTINLPAPTSNVSQLIQSFAKRGLTVKDLVTLSGGHTLGFSHCSSFEARLRNFSSLHDTDPSMNTKFALDLRKKCPKPNHNRNAGQFLDSTASVFDNDYYKQLLAGKGVFFSDRSLVGDHRTRWFVEAFAKDQGLFFKEFTASMLKLGNLRGSKVGEVRLNCRIAN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2214 281 ProSitePatterns Peroxidases proximal heme-ligand signature. 143 153 IPR019793 -
Aed1g2214 281 Gene3D - 95 281 - -
Aed1g2214 281 PANTHER PEROXIDASE 25-RELATED 95 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 PANTHER PEROXIDASE 25-RELATED 29 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 CDD secretory_peroxidase 48 278 IPR033905 GO:0004601|GO:0042744
Aed1g2214 281 PRINTS Plant ascorbate peroxidase signature 137 158 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 PRINTS Plant ascorbate peroxidase signature 96 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 Gene3D - 49 94 - -
Aed1g2214 281 PANTHER PEROXIDASE 66 95 280 - -
Aed1g2214 281 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 ProSiteProfiles Plant heme peroxidase family profile. 81 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 PANTHER PEROXIDASE 66 29 95 - -
Aed1g2214 281 Gene3D Peroxidase, domain 2 121 265 - -
Aed1g2214 281 SUPERFAMILY Heme-dependent peroxidases 49 281 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed1g2214 281 Pfam Peroxidase 95 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2214 Aed-Chr1 18459614 18461141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2214 64 281 Peroxidase AT5G51890 59.729 3.41e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2214 K00430 - gmx:100799516 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0510 7 3713324 3715572 Aed1g2214 1 18459614 18461141 PCT