Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2211 ATGGGCAAGGAGTGGCATTGGGGTAGTGGTGGAAGGTCCTCCAAGAGAGGTGGAAGTGCTGAAACACAAATCCCTTCCGGTTGCGTGTGTGCAATGTTTCAAGCCTTTGATTTTCATCCATTTCACTTTTCCAATATTAACCACCAACAATCCTCTTTCAAGTCTCGCACCCCAGAAGACCACACTGTCCCCAAAGGAGCTGAAGCACCGAGGAGTAGCTTGGAGTCAGAAAATGGTACTACAGTGTCATCAGTCTCAAAAGAAGAAATTTTTAAAATACCAAAGAGCATTCGGATCAAAACAAGAGGGAGCACAAGATCAAGAGCAGAAAGTTTTAGTGATCTTTCCTCAGAGATCAGTGCCTCTCCAGGGACCAAGACTCCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCACATTCCTCTTCTTCTTCTTCCCCATCTCTTTCCACTCCAAACCTTCAAACACCACGGCAACACATCAAAATAATCAAACATAGAAACAGCACAGGCAGTACTAACACCTTGCCTGAGACTCCAAGAATGTCCTCTGGAAGAAGATCAGATGTTGAGCATAGACTCTCTCTCCAAATCAACAAGGAGAACACAGTCCCCTATGATGAGGATTTTGAGGCTCCTCGGTTTTCATTTTCAAAGAGGAAATATGATGAGAACAGTTGCAGGAGTCCAAGCCACTATGCCAGGCAAATTGTCAAACAGGTTAAAGAAAGTGTGAGCAGGAAGGTTGGACTTGACATCACCAACACTGTCAACAAGAACAGAGAACAAGGAAGAGTAGAAGAATTTGTAGGCCAATTCAAATTCAAGAAAACTCCTAAAACATTATCAGTGAATGAATCCAGCCCTGGAAAACACTCTAACTCTTCTTACTCCCCAAGACTCAGCAGATTCATTGATACCAAACACAAACCAACAACACAATCACCAACGACTACTCCAAAAAATCAAACCACACATTCACACTCAGTCCTAAAACCAGCATCACCTCCTCCTCCTGTTGTTGTCAACATTGAAACACAGCTTTCAAGAGTTTCTACAAAGCCAAAGCCTCGAGCGTTGGCCGAGAGAGACTTGCAGAACCAGAAATCAGTCACAAAAGTCAAGAACAACACCACCCGTGGAAAGTTGAGTTCCCGGGTCAACAAGCCTTCACAGACATCAATTCTTCTTAAGAAAGAAGAGTCATTTATTACTCGTCCCACATCAGCCACTAAAGCCAATGATATCAAAACCAAAAACAAGAGAACTCATCCACTTTCAACCAATCTTCTTAATAACCTCAACACGGTTCCAAATCTTCTCCCTGTCAAGACAGTCCTTTCTCCTCATAAACAGTCACAGGTATGTGATGATGATGCTCGAGATGCAAAAAGCAGCACACAGTTATTTAGTTGTTCGCGCCTGACGACGTACAAACAAGAACAAGAAGCGCCACGACCACACCCACCCCGAGGAGCAACCAGCAGCGATGACGACAAATCTCACGGCACCTCCGCCACCACCACCGGCGCAGAATATCAGTACATCACAACCATCCTAAACAGTGGGCCCCACAACCTCCAGTTTCAGTGGTTCTCCCCGACCCACCCCTTGGACCCTTCAGTTTTTCACCGTCTTGAGCGCTACCCAACATCCAATTCCTTTGTATCGTTCCCCGAAGACAACAAAGATTGCATCTTTGAACGGAAACACCAACTGGGTCCGCGCTGCAACCGTCGATTACTGTTCGACTTGGTCGACGAGTTGCTGTCGGAGATTCTAGTTCGGCCGAGGCGGTACAAGGGGGCGTTGTTGGAGACTGTGTGGGACAGGGTTCGGAGCTTCCCACGTGCGAAGTGTTCGGTTTTGGAGGACATTGACTCGTTGATTGAGACGGAGGAGATGAGGGAAGATGAAGAAGGGGAAGGGTTGGTGAAGGAGATTGAAACCACCGTGTTTCAGACGTTGGTGCATGAAACGTTTACCATTATGCTTCGTAGTGGTGGTGCTGGTACTACGTAG 2034 0.4617 MGKEWHWGSGGRSSKRGGSAETQIPSGCVCAMFQAFDFHPFHFSNINHQQSSFKSRTPEDHTVPKGAEAPRSSLESENGTTVSSVSKEEIFKIPKSIRIKTRGSTRSRAESFSDLSSEISASPGTKTPTLVARLMGLDLLPDAHSSSSSSPSLSTPNLQTPRQHIKIIKHRNSTGSTNTLPETPRMSSGRRSDVEHRLSLQINKENTVPYDEDFEAPRFSFSKRKYDENSCRSPSHYARQIVKQVKESVSRKVGLDITNTVNKNREQGRVEEFVGQFKFKKTPKTLSVNESSPGKHSNSSYSPRLSRFIDTKHKPTTQSPTTTPKNQTTHSHSVLKPASPPPPVVVNIETQLSRVSTKPKPRALAERDLQNQKSVTKVKNNTTRGKLSSRVNKPSQTSILLKKEESFITRPTSATKANDIKTKNKRTHPLSTNLLNNLNTVPNLLPVKTVLSPHKQSQVCDDDARDAKSSTQLFSCSRLTTYKQEQEAPRPHPPRGATSSDDDKSHGTSATTTGAEYQYITTILNSGPHNLQFQWFSPTHPLDPSVFHRLERYPTSNSFVSFPEDNKDCIFERKHQLGPRCNRRLLFDLVDELLSEILVRPRRYKGALLETVWDRVRSFPRAKCSVLEDIDSLIETEEMREDEEGEGLVKEIETTVFQTLVHETFTIMLRSGGAGTT 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2211 677 MobiDBLite consensus disorder prediction 100 126 - -
Aed1g2211 677 Pfam Domain of unknown function (DUF4378) 516 663 IPR025486 -
Aed1g2211 677 PANTHER DUF4378 DOMAIN PROTEIN 1 669 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 49 86 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 372 395 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 106 126 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 478 512 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 171 192 - -
Aed1g2211 677 Pfam DUF761-associated sequence motif 116 146 IPR032795 -
Aed1g2211 677 MobiDBLite consensus disorder prediction 284 335 - -
Aed1g2211 677 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 669 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 284 345 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 1 21 - -
Aed1g2211 677 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2211 Aed-Chr1 18440293 18445004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2211 97 669 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.390 7.06e-53 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2211 - - gmx:102659931 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2211 1 18440293 18445004 Aed1g2211 1 18440293 18445004 ECH
Aed7g0509 7 3701743 3706070 Aed1g2211 1 18440293 18445004 PCT