Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2202 ATGCAGTTTAAATGTTTCAGTTGTTTTCTTTGTGATAAAGAGCAACCAGAAATACAGAATGGCAACAAGAAAAATAGGGACTATCCATGGGAAATATACACCTTGAAGGAGTTGCTTCGTGCAACAAACAATTTCCATCAAGATAACAAGATAGGAGAGGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGCAGTGAAGCGGTTGAAGACTATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTTGAAGTACTAGGAAGGGTGAGGCATAAGAATTTGTTGGGCTTGCGTGGATTCTATGCTGGAGGCGATGAAAGGTTGATTGTTTATGATTACATGCCTAATCACAGTTTGCTCACCCATTTGCATGGTCAACTTGCCGCCAATTGTTTGCTAGATTGGCCTAAAAGAATGAGCATAGCAATTGGAGCAGCTGAAGGCTTAGTGTATGTGCTCCTCTTAAAGTTTTGCCAATCCTTTTTTTAG 504 0.4107 MQFKCFSCFLCDKEQPEIQNGNKKNRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGQLAANCLLDWPKRMSIAIGAAEGLVYVLLLKFCQSFF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2202 167 ProSiteProfiles Protein kinase domain profile. 45 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2202 167 Pfam Protein kinase domain 45 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2202 167 ProSitePatterns Protein kinases ATP-binding region signature. 51 71 IPR017441 GO:0005524
Aed1g2202 167 PANTHER OS01G0750732 PROTEIN 2 157 - -
Aed1g2202 167 SUPERFAMILY Protein kinase-like (PK-like) 30 157 IPR011009 -
Aed1g2202 167 Gene3D Phosphorylase Kinase; domain 1 10 118 - -
Aed1g2202 167 PANTHER - 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2202 Aed-Chr1 18383712 18384451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2202 11 157 Trihelix Transcription Factor Family AT4G32710 40.268 2.01e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aed1g2202 Pkinase 1.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2202 - - gmx:100817283 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0498 7 3620346 3622118 Aed1g2202 1 18383712 18384451 PCT