Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2200 ATGCCATCTCGACAACTGTCCACGTCAGCACCGCCTCCCAACCACCGGGTCTCAACCCCTCTCTTCGCTTCCAGCGCCTCCGTTTGCTCTCTATGCTTTTTACTTCTCCTTTGCTTCCGGAAGCGCAAACGCACCACCCCCGCCTCCGACGACTCCGACTCCAACTCCAACCCCCCTCACCCGTTCTCCTACCCCGTCCTCCGCCGCGCCACGAACTCTTTCTCGACGCGCCTTGGCCAAGGCGGCTTCGGCCCCGTCTTCTCCGGCACCCTCGGCGGCGAGCCCGTGGCCGTGAAGCTCATGGACTCTGCCTCCCTCCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTCATCGCGTCCAGGCTCCGGTCCCCTCTCGTGGTCCCCGCCATCGGATTCTCCTCCTCCTCCTCCGACCCCAAACGACGCCGTTTCCTACTCGTCTATCACCTCATGCACAACGGCAACCTCCACGACGCGCTCTTGCGTAACAAAACCCCACACCTCACGCGCTGGAATAACCGCTTCTCCATAATCCTCGACGTCGCCAAAGGAATCCACTATCTCCACTCCCTCGACCCCCCCATAATCCACGGCGACATCAAACCTAGCAATATTCTTCTCGACAGTTCCTTCTCCGCCAAACTCGCCGACTTCGGCCTCGCCCGCTTAAAATCCGATTTCCAAGAAATTACAGTAAAACCCGAGGAAAAGAAAAAGGAAGAGCCCGAGAGCGACGCTGGCTCCGAATTAGAAACTCAGAGCGTCAACACCGAACAATCATTTGGTGAGAACACTCCCTCGGATTATGTCATGGATTGGATTGGGAAGGAGGTAGTAGTCAAGAAGAACAATGGTTCTTCTTCTGTTGCTGCTGCAGGATCGAGTAGTGGAACGGTGGAGAAGAAGAAAAGTAGGAAGAAACTGGAATGGTGGGAATCGATGGAGGATAGCGGGGTTATGAAGAAGGAGAAGAGAAGGCCGGCGAGGGAGTGGTGGAAGGAGGAGTATTCAGAAGAGCTAGCAAGGAAGAAGAAGAAAAAGAAGAAGAAGAGGAAGGGTAATGATGATGATGATGATAATAATAAGAAATTGGAGATAGACGATGTGTACAGTGATGTAAAAGTATACAAGAGGGAGAAGAACCGGAGTAGGAACAGTGGTCGTAGTGTAGATTCGTGGTTCAGCGGGGAGCTGCGTGGAATTCGATGGAACAGCAGCTATGATTCCGGGACAGGGAGTGGAGGAGAGATGGTAGCACCAAAGAGTGGTGGTGTGAGTAGCACTCCAAGTATGAGGGGGACGGTATTCTACGTTGCTCCAGAGTATGGGTACAACGGCGACGTTTCTGAGAAGTGTGACGTGTACAGCTTCGGGGTTTTGTTGCTGGTTATTGTGTCTGGGAGGAGGCCACTTCAGGTGACTGGGTCTCCGATATCGGAGTTCAAGCGTGCAAATCTGGTATCTTGGGCGAGGCAATGCGGGCGGAGAGGGAAGGTTTTGGAAGTGGTGGATGAGAGCGTTGAAGGGTTGGATAAAGAGCAGGCTAGTCTCTGCGTCACGGTTGCGCTCATGTGTTTGCTTAAGTCACCTGCCCGTCGTCCTTCCATGGAGGAGGTCGTGGGAATGCTCAGCGGGGAGATAGAGCCGCCGCCTGAGTACTCATTCCCGTTCAAGACTAGGAAAGAAGGCCGGTGA 1698 0.5442 MPSRQLSTSAPPPNHRVSTPLFASSASVCSLCFLLLLCFRKRKRTTPASDDSDSNSNPPHPFSYPVLRRATNSFSTRLGQGGFGPVFSGTLGGEPVAVKLMDSASLQGEREFHNELFIASRLRSPLVVPAIGFSSSSSDPKRRRFLLVYHLMHNGNLHDALLRNKTPHLTRWNNRFSIILDVAKGIHYLHSLDPPIIHGDIKPSNILLDSSFSAKLADFGLARLKSDFQEITVKPEEKKKEEPESDAGSELETQSVNTEQSFGENTPSDYVMDWIGKEVVVKKNNGSSSVAAAGSSSGTVEKKKSRKKLEWWESMEDSGVMKKEKRRPAREWWKEEYSEELARKKKKKKKKRKGNDDDDDNNKKLEIDDVYSDVKVYKREKNRSRNSGRSVDSWFSGELRGIRWNSSYDSGTGSGGEMVAPKSGGVSSTPSMRGTVFYVAPEYGYNGDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPISEFKRANLVSWARQCGRRGKVLEVVDESVEGLDKEQASLCVTVALMCLLKSPARRPSMEEVVGMLSGEIEPPPEYSFPFKTRKEGR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2200 565 SUPERFAMILY Protein kinase-like (PK-like) 56 555 IPR011009 -
Aed1g2200 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Aed1g2200 565 Gene3D Transferase(Phosphotransferase) domain 1 413 550 - -
Aed1g2200 565 MobiDBLite consensus disorder prediction 343 364 - -
Aed1g2200 565 Gene3D Transferase(Phosphotransferase) domain 1 58 249 - -
Aed1g2200 565 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 564 - -
Aed1g2200 565 SMART serkin_6 72 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2200 565 MobiDBLite consensus disorder prediction 249 267 - -
Aed1g2200 565 Pfam Protein tyrosine and serine/threonine kinase 74 234 IPR001245 GO:0004672|GO:0006468
Aed1g2200 565 ProSiteProfiles Protein kinase domain profile. 72 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2200 565 Pfam Protein kinase domain 428 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2200 565 MobiDBLite consensus disorder prediction 234 269 - -
Aed1g2200 565 Coils Coil 334 354 - -
Aed1g2200 565 PANTHER OS07G0586332 PROTEIN 1 564 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2200 Aed-Chr1 18357508 18359205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2200 422 544 Receptor kinase-like Gene Family AT3G58690 38.760 7.94e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aed1g2200 PK_Tyr_Ser-Thr 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2200 - - gmx:100817816 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2200 1 18357508 18359205 Aed1g2200 1 18357508 18359205 ECH
Aed7g0495 7 3599303 3601978 Aed1g2200 1 18357508 18359205 PCT