Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2196 ATGAAGTTCATAAATTATGACTTTGCACTTGCGCCTCTCTTTGCAACAGTAATAGCTGTTATCTTAGCTGCTATTGTTATCAAAATTCATGGCAGTAGATATTTTGACAAGAAAAGAAAATACCACCCTATTGCTGGCACTGTCATACACCAAATGTTCAACTTTCCTAGGCTTTTCGATTACATGACCCATCTTGCAAGCCAGAGAAAAACTTACAGGTTGCTTAGCTTCTTCGGAACTGAGGTCTACACTGCAAACCCTCAAAATATTGAGCATATCCTCACCACAAACTTCGCAAACTACGGCAAGGGTTGGTATCACCATAGTATCTTGTCAGATTTTCTTGGAGCCGGTATATTCGCAGTGGATGGAGAAATGTGGAGACATCAGAGAAAGGCAGCAAGTTATCAATTCTCAACCAAAATGTTGAGAGACTTCAGCAATTCAGCGTTCAAATCCAATGCAGTAAAACTTGCAGAGATAGTGTCTGAAGCTGCAATCTCAAACAATGCCATTGAGATGCAGGATTTCTTCATGAAATCAACTCTAGATTCTGTATGCAAGGTTATCCTTGGTGTTGAACTTGACACCATGTGTGGAACCTATAAACAAGGCACAGAGTTCTCCAATGCTTTTGATGAAGTAAGTGCTGCTATCATGTATCGGTATTTTAACTTTCTCTGGAGGATTATGCGGTTCTTAAACATTGGATCAGAAGCCGTACTTAGGAACAGTGTAAGAGTGGTTGATGAATTCGTGTATATACTAATCAGAAGCAAGATTGAGCAGATCCAAATGCTACAAGAAAATTCTCCTGAGATGAAAGAAGACATTTTGTCGAGGTTTATTGAATTGAAAGAAACTGATCCAAAGTACCTTAGAGACATTTCCTTGAGTTTTATCCTTGCAGGGAAAGATACAACATCGGTTACTCTTTCCTGGTTCCTTTACGAACTCTGCATGCATCCTCATGTGCAAGAGAAGATTGCACAAGAAATTAGGGATGCAACAAATGTAGCAGCTGGATCAACCATTGATGAACTCGCAGGTAGAGAAGGAAAGTATTGTTTTTCAGATGACACGTGGCCAGATGGATATAGTGTGAGAAAAGGTGATCTTGTGTCATTCCAACCATATGCCATGGGAAGGATGAAATTCTTGTGGGGTGATGATGCTGATAAATTCAGGCCAGAGAGATGGCTTGATGAAAACGGAATTTTGAAGAAAGAAAGCCCTTTTAAGTTCACTGCCTTCCAGGCGGGTCCAAGAATTTGCCTGGGGAAGGAGTTCGCATACAGACAGATGAAGATTTACTCTACAATCCTCTTAGGTTGCCACAGCTTCAAACTGGCAGACCCAAAGAAATCAGTAAAATACAAAGTATCGCTTACTCTTCAAATTGATGGTGGTCTGCACGTGTATGCTTTTAAGAGACAGAATTAA 1443 0.4026 MKFINYDFALAPLFATVIAVILAAIVIKIHGSRYFDKKRKYHPIAGTVIHQMFNFPRLFDYMTHLASQRKTYRLLSFFGTEVYTANPQNIEHILTTNFANYGKGWYHHSILSDFLGAGIFAVDGEMWRHQRKAASYQFSTKMLRDFSNSAFKSNAVKLAEIVSEAAISNNAIEMQDFFMKSTLDSVCKVILGVELDTMCGTYKQGTEFSNAFDEVSAAIMYRYFNFLWRIMRFLNIGSEAVLRNSVRVVDEFVYILIRSKIEQIQMLQENSPEMKEDILSRFIELKETDPKYLRDISLSFILAGKDTTSVTLSWFLYELCMHPHVQEKIAQEIRDATNVAAGSTIDELAGREGKYCFSDDTWPDGYSVRKGDLVSFQPYAMGRMKFLWGDDADKFRPERWLDENGILKKESPFKFTAFQAGPRICLGKEFAYRQMKIYSTILLGCHSFKLADPKKSVKYKVSLTLQIDGGLHVYAFKRQN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2196 480 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 Pfam Cytochrome P450 58 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 SUPERFAMILY Cytochrome P450 40 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 Gene3D Cytochrome P450 37 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g2196 480 PANTHER - 12 349 - -
Aed1g2196 480 PANTHER - 352 478 - -
Aed1g2196 480 PANTHER CYTOCHROME P450 352 478 - -
Aed1g2196 480 PANTHER CYTOCHROME P450 12 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2196 Aed-Chr1 18335435 18338363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2196 9 480 Cytochrome P450 AT2G45510 46.562 2.49e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2196 - - pvu:PHAVU_007G063800g 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2196 1 18335435 18338363 Aed1g2196 1 18335435 18338363 ECH