Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2189 ATGGCCTCTATAACCGAAAGCGAGAGTTCAGCCGATACTTCTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGCGGCAACGGTTTTTGCTTGAATTGGAGTTTGTTCAATGCCTTGCCAATCCTACCTACATCCACTATTTGGCTCAGAATCGATACTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAACGCCCTGAATATATTAAATTTATTATGTATCCTCATTGCCTCTATTTTCTTGAGCTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCAACCAATAAGGAACTTGCACACAGACAACAATTCTTCTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCACTTCCTGAACCTAGCGCCACCACACCTGTAGCTCCTGCTCCTGCTTCAACTACAGCTCCGGCACCTGGGTCTGCACTACCACCAGTACCTGCTACAAGTGTTGCTGTGACAGCAACACCCACTCAAGCTCCTTCTCCTATGCCATATGGTATGAATGCAAAAAATGACATGAGGAATCCTACAGTTGATAATAGAAGGAAGAGAAAGTAA 612 0.4248 MASITESESSADTSPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFFFWKNYRNNRLKHILPRSLPEPSATTPVAPAPASTTAPAPGSALPPVPATSVAVTATPTQAPSPMPYGMNAKNDMRNPTVDNRRKRK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2189 203 MobiDBLite consensus disorder prediction 1 20 - -
Aed1g2189 203 MobiDBLite consensus disorder prediction 133 203 - -
Aed1g2189 203 MobiDBLite consensus disorder prediction 168 182 - -
Aed1g2189 203 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 11 157 IPR008831 GO:0003712|GO:0006355|GO:0016592
Aed1g2189 203 MobiDBLite consensus disorder prediction 1 23 - -
Aed1g2189 203 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Aed1g2189 203 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Aed1g2189 203 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 11 157 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Aed1g2189 Med31 1.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2189 K15153 - gmx:100527879 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2189 1 18285923 18288812 Aed1g2189 1 18285923 18288812 ECH