Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2181 ATGGAGGAAGAGAGTGAGTGTTTCGAGTGCCTCCAACTTCGAATAAAATCCGATTTATCGGAGCAAGTCTTCTTCAATTATGCCATCTCCACTTCTGCTTTTCCCTTCGGATCCTCCGCTATCGTTAATATTTCCGGTACAGCTGATAGTGAAGCTTTGGGCGCTCAATTTTTATTGCAGTACATGCCTAGTCGTGATAAGAATTGTTTTATCAATTATGTAAATGAATATAATTTGGATAGTGGTGAAATCACTATCACAACTGGGAGTAGTGATCCTGATATTGGAAGCAGTGAAGATAATAATGTTGTTAATGGTAGAATTACTTCATCAAATGATTCTGACAGTGGAAATGCATTTTCTGGAAGCACGAATTGTAGTCATTCTGGAAGGTTTTGTTGCTTGAGGACAATCACTTCACTTGCGACGATTGCTCGTGTGGGGATGTCTTCCTTTTCCACTTTTCAAGCGGTCTCCACTGATTTCTTGTCGGGGTTTATTGAAGATCACGTGTTAGATTCTCTTGATCTCTTCATTGAAGGGAAAGCGTCTGGACAGGACAGTGTAAATTTCCTTAGTTTAATTGGGTTGCCATCATTTGAGGAGAATAATTTTCCAGGCTCCTTGAGGCATCCCAACATAGCTCCTGTCCTTGCAATTTTTAAAACAGCTGATCACGTTAATGTTGTGCTTCCAAAGGCTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCACTGCCTTAAAGTCTGATTGGAATAGAAGGTTTCTTATGTATCAGCTACTCTCAGCTTTATCGTACATACATGGTTTAGGGGTTTCTCATGGTAATATATGCCCATCCAATATCATGTTGACTGACTCGTTATGGTCTTGGCTGAGATTATGGAATGAACCTGTATTGGAATCTTATTTAACTCTGCAGGAGAGTGAAAGTGTTAATTCTGAAGCTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCATTCTTATGGCCTTTATGCTGATCTAAAGCTTTCTCCAACAATAGATTGGCAATCTTGCTTTCATAAGTGGTGGAGAGGAGAATTAAGTAACTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTCCACCCAGTAATGCCTTGGGTTATTGATTTTAGCTCAAAACCTGATGATAATTCTGATGCAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAATTGGATTTCACCTATTCAACGTCAGAAATCCCTCATCATGTTTCAGACGAATGTCTGTCTGAATTGGCTGTCTGTAGTTATAAAGCAAGAAGACTCCCTTTGAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCTACAATGCAGAGGCTCTATCAATGGACCCCTGATGAATGCATTCCGGAGTTTTACTGTGATGCCCAAATTTTTAAGTCAATACATGATGGAATGGCTGATTTGGCTGTACCTTCTTGGGCGGAGAGTCCTGAAGATTTCATAAAATTGCATCGTGATGCATTAGAAAGTAATTGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTTCAAAATGTCTGGCCAGGCAGCTATTGCCGCTAAGAATGTGATGCTTCCTATATCAGAACCCATGATGCCAAGATCAACAGGACGTCGCCAACTCTTTACACAACCACACCCCATCCGTCATACCACTACCCGAACAAAACGTTATGGTTCCAATAAATATGCCAAAGTTTGGAGTCAAGCAAATGAAATGCTCCAAGAGACATCTCTTCTATCTGAAACTGCTTATCTACTAGAACTAGAGCAAGCATCTACATTTTCTGAACATGCTAGGCATTTGAATGCCTGTTACCATTATCCCTTAAATCAAAGGACAGGGAAGAACATCTCATCTTTGGGAGATCCAACAACAAAGACATTTAATGAAAGTATAAGCAAACTATCTTTGATCGGCAGAAATTATCAGGTGCCGTACAAAATGAATCTAATATCTTTTCTTCAAAATATGAAAGAGGAAGATGATAGCTCCTCAGGATATCCAGACTTGCTACTTTGGAAGCAGAAATTATCTTCATCAAGACTTTGCTCTGAAGATGTTGCTAGGGATATATTTTCTATTGGTTGTCTCTTGGCTGAACTTCATCTTTGCAGACCACTCTTTGATCCAATCTCATTGACAATATACTTGGAAGATGGAACCTTACCAGGATTTCTGCAGGATCTACCTCCTGATATTAGGTTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGACCATCTGCCAAAGTTCTTCTGGAATCTCCTTATTTTCCAAAGACTGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTATAGCTAAGGATGAAACTCGTCTTCGTTATGCTGCAAACCTTGCAAAACACGGAGCTCTCAGAGAAATGGGCACATTTGCAACTGAAATGTGCACTACTTATTGCTTACAACTTATAGTGAATGCTGTGAGTGATACTGAAGCTGAATGGGCATATATACTACTGAAGGAATTCATGAAATGCTTATCAGTTCAAGCAGTGAAAACATTAATCTTGCCAACCATACAAAAACTTTTACAGGCTAGTTGCAAACTTGATTTTACCACAGGTTATTTACGTTTAAAGGTTGCCCTTCTACAAGATTCATTTGTACGGGAAATATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATGCATTCATTGGTCCTGTCAAACTTGTACATTTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGTGAGGAGCTTGGTGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTATGTGCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATAGTCAAACAGATGGTACCTTTACTGAAAAATGTTGTCCGTTCTTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTACAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAGGTCATTGTAAAGGAGCTGCTAGAAGACCTAAGTTGCATACACATCGGAGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTAGCTGCTTCTACTCTTTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACAGCATTGCATATTCTTCCAAAACTTAATGAACTGTTTGATGAGCTTGCTTTCTCCCAGGATATTTCTAAAGGTTCAACTACTGTTGGCAGAAACTTGAAGGTTGGCAAAATAAAAATTGGAGGGGACTTGCATATTGAAAGTCGTATGGATCTAGTAACTCTAGGTAGAGAAGAGGGAATGTGGGAATATGCTGGAGAATCATCAAAAAACGGCTCAGACATTATTCTTGCTAGAAGACCTGTAATAGCCCAGGGATTAACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGAAGTGCCAAAAATTTGATCTCTCAGAGACGACCATTAAAAGTTCATCAAAGTCCAGTAGTAGTGCACGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGAGTTCAGAAAGATGATCTTCCATGGAAGATCAGAGCATCTGTTATATACTCTATACGTGCACATCATGGAGCAGTGAGGTCTCTGGCAGTTAACCAAGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAATGGGAATTGAGCCGGACTAGCTGTCTGTCTGGCTATCATGGCCATGAGGAGGTTGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTGGCTTCTTGTGATGGAACAGTTCACATTTGGAATAGTCAAACAGGAAAGCAAATATTAGTATTTGCTGAGTCCCAAACAGAATCTGGCCATCCTACAAGCCATCCATCCTCTGCATCAAAAATTAACAGTGACCAGGCAAATGTGCTTAATTTGAATACACTATCCAATGGAATATTGTCTAGTGCTTTTGACTCGAGCCTTTATACTTGTATGCATCTATTAAACTCAGCTGAAACTCTTGTAGTTGGAACTGGAAATGGTTCTCTGAGGTTCGTTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGTGAATCTACTGAATCTAGTTTTCCTTCACTCATTTCTGCCATTTGTTCCACTGGCTCTGACAAGATGCAAGCCTGTGGAATTTCCACTCTGCCATCTTTTATTGCTGCTGGACTAAGTTCTGGTCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTGCTTGTTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTACGAATGAATTTGCCATTGCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGACTTCTCTCCTTGTCTAAATCTTCCAATGAAACTGATTGGCAGCATCACATTAACCCCCAGAGACTATATGTTTCTGATAATAATAATGGTCAGAGAAGCTTGTCAGCGTTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATCGGAACCGAAGATGGTTATCTCAGAATCTGTTGTTAA 4923 0.4042 MEEESECFECLQLRIKSDLSEQVFFNYAISTSAFPFGSSAIVNISGTADSEALGAQFLLQYMPSRDKNCFINYVNEYNLDSGEITITTGSSDPDIGSSEDNNVVNGRITSSNDSDSGNAFSGSTNCSHSGRFCCLRTITSLATIARVGMSSFSTFQAVSTDFLSGFIEDHVLDSLDLFIEGKASGQDSVNFLSLIGLPSFEENNFPGSLRHPNIAPVLAIFKTADHVNVVLPKAPYNLESILHFNPTALKSDWNRRFLMYQLLSALSYIHGLGVSHGNICPSNIMLTDSLWSWLRLWNEPVLESYLTLQESESVNSEAARIGCCNVGCHSYGLYADLKLSPTIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNSDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFKSIHDGMADLAVPSWAESPEDFIKLHRDALESNWVSFQLHHWIDITFGFKMSGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHTTTRTKRYGSNKYAKVWSQANEMLQETSLLSETAYLLELEQASTFSEHARHLNACYHYPLNQRTGKNISSLGDPTTKTFNESISKLSLIGRNYQVPYKMNLISFLQNMKEEDDSSSGYPDLLLWKQKLSSSRLCSEDVARDIFSIGCLLAELHLCRPLFDPISLTIYLEDGTLPGFLQDLPPDIRLLVEACIQKDWMRRPSAKVLLESPYFPKTVKSSYLFLAPLQLIAKDETRLRYAANLAKHGALREMGTFATEMCTTYCLQLIVNAVSDTEAEWAYILLKEFMKCLSVQAVKTLILPTIQKLLQASCKLDFTTGYLRLKVALLQDSFVREIWNRVGKQAYLETMHSLVLSNLYISPDKSSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNKPDPVQSWSALALIDCMMTLDGLVAFLTEEVIVKELLEDLSCIHIGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLNELFDELAFSQDISKGSTTVGRNLKVGKIKIGGDLHIESRMDLVTLGREEGMWEYAGESSKNGSDIILARRPVIAQGLTSEYNPAKLLLNGVGWSIPQSQGRSAKNLISQRRPLKVHQSPVVVHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTSCLSGYHGHEEVVNDICILSSSGRVASCDGTVHIWNSQTGKQILVFAESQTESGHPTSHPSSASKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLNSAETLVVGTGNGSLRFVDVARGQKLHIWRGESTESSFPSLISAICSTGSDKMQACGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSSSLDRTLRVWDLRMNLPLQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSSNETDWQHHINPQRLYVSDNNNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC 1640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2181 1640 Pfam Protein kinase domain 201 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2181 1640 Pfam WD domain, G-beta repeat 1504 1540 IPR001680 GO:0005515
Aed1g2181 1640 Pfam WD domain, G-beta repeat 1323 1358 IPR001680 GO:0005515
Aed1g2181 1640 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1509 1542 - -
Aed1g2181 1640 Gene3D BEACH domain 341 591 IPR036372 -
Aed1g2181 1640 SUPERFAMILY BEACH domain 328 581 IPR036372 -
Aed1g2181 1640 CDD Beach 351 581 IPR000409 -
Aed1g2181 1640 SMART WD40_4 1275 1318 IPR001680 GO:0005515
Aed1g2181 1640 SMART WD40_4 1502 1540 IPR001680 GO:0005515
Aed1g2181 1640 SMART WD40_4 1605 1640 IPR001680 GO:0005515
Aed1g2181 1640 SMART WD40_4 1460 1499 IPR001680 GO:0005515
Aed1g2181 1640 SMART WD40_4 1403 1440 IPR001680 GO:0005515
Aed1g2181 1640 SMART WD40_4 1321 1358 IPR001680 GO:0005515
Aed1g2181 1640 Gene3D Transferase(Phosphotransferase) domain 1 201 299 - -
Aed1g2181 1640 SUPERFAMILY Protein kinase-like (PK-like) 207 291 IPR011009 -
Aed1g2181 1640 PANTHER GH12955P 1 1640 - -
Aed1g2181 1640 ProSiteProfiles Trp-Asp (WD) repeats profile. 1509 1542 IPR001680 GO:0005515
Aed1g2181 1640 Pfam Beige/BEACH domain 351 561 IPR000409 -
Aed1g2181 1640 Gene3D Transferase(Phosphotransferase) domain 1 701 798 - -
Aed1g2181 1640 ProSiteProfiles BEACH domain profile. 337 606 IPR000409 -
Aed1g2181 1640 CDD PKc 208 289 - -
Aed1g2181 1640 SMART Beach_2 349 581 IPR000409 -
Aed1g2181 1640 ProSitePatterns Trp-Asp (WD) repeats signature. 1527 1541 IPR019775 -
Aed1g2181 1640 Gene3D - 1476 1640 IPR015943 GO:0005515
Aed1g2181 1640 Gene3D - 1271 1475 IPR015943 GO:0005515
Aed1g2181 1640 SMART serkin_6 141 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2181 1640 ProSiteProfiles Protein kinase domain profile. 141 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2181 1640 SUPERFAMILY Protein kinase-like (PK-like) 719 814 IPR011009 -
Aed1g2181 1640 SUPERFAMILY WD40 repeat-like 1278 1638 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2181 Aed-Chr1 18209863 18218679 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Aed1g2181 Beach 9.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2181 K17601 - gmx:100809116 3015.71