Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2176 ATGAATCCTGGTGGTCGTCGAGTAAAGGAAGAGTTTGTTGGAGAAAGTTTGATTGGCCCCAGTAAGTTTATTTGGTTTGGGTTTAAAAAGGTGGATCCAGATAAGTGGGAGTTTGCTAATGAGATGTTTCTCAGAGGGAAAAGGATTCTCTTGAAGAACATTAGAAGGAGGAGAGCAAATCATCAATCTCACGCGATGCATCAGCAAGGTGTAGAGTCTTGTGTTGAGGTGGGGGAGTTTGGATTAGATGGAGAAGTTGATCGGTTGAGGCGTGACAGGCAAGTCCTGATGGTGGAGTTGGTGAAACTCAGACAACAACAACAAAGTACCAAAGCTCACCTTCAAGAAATGGAAGGAAGGCTTAAAAAGACTGAGCAGAAGCAGCAACAAATGATGAATTTCTTGGCCAGGGCAATGCAGAATCCCAACTTCGTGCAACAATTGGTTCAGCAAAAGGAGTGGAGATCAAAGGAGCTTGAGGAAGCTTTTCACAAGAAGAGGAGAAGGCCTATTGATCAAGGACCTGGTGATGTTGTAGATGAGTGCTCCACTTTCGTTAAACATGAACAGCAAGAATACACTGACAATGTATTAGATCAGTTTGAGGTGCCTGATCTAGACCTTGCTTTGAATCTTGAGGAAGAGGGAATGGAGGAACTAGATCATATTCAACTTGAAAGTAGAGATAAAGATATTGATGAAGTACTGTTTTGGCAAGATTTGCTATTTAATGAGGGTATTGAATTTGAAGAAGATCAAGATGTAGTAGGTGTTGAAGATCATGTAGATGTATTGGCCAAACAACTAGGTTTTTCGGTCTCTAGTCCAAATTAA 834 0.4137 MNPGGRRVKEEFVGESLIGPSKFIWFGFKKVDPDKWEFANEMFLRGKRILLKNIRRRRANHQSHAMHQQGVESCVEVGEFGLDGEVDRLRRDRQVLMVELVKLRQQQQSTKAHLQEMEGRLKKTEQKQQQMMNFLARAMQNPNFVQQLVQQKEWRSKELEEAFHKKRRRPIDQGPGDVVDECSTFVKHEQQEYTDNVLDQFEVPDLDLALNLEEEGMEELDHIQLESRDKDIDEVLFWQDLLFNEGIEFEEDQDVVGVEDHVDVLAKQLGFSVSSPN 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2176 277 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 259 IPR027725 -
Aed1g2176 277 Coils Coil 86 127 - -
Aed1g2176 277 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 26 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2176 Aed-Chr1 18183787 18185580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2176 26 275 HSF AT3G22830 49.135 1.53e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2176 K09419 - gmx:100809515 362.073