Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2169 ATGGCTGGTAGGTTGCCTGGTGTTGGGTTGCTTGCAAGGAAGAGAACAGAACAGAACCATAGTAGATATCAACACCAACACCAACACCAACACCAACACCAACACTTCTCCTTTAATAATAATAATAGAGATTCATCATCACTCACTGTCTCTGTCTCTGTCTTAGATGAAACTGCTCTCAAGGCCAGACAAAGGCTTCACAAGAAGCTTGGACACTTCTTTTCTTCATACAGGTCAAATGAGAATCCAAGAAAAGAAGAAGGAAAAGTAAGCGAAAGCAGGTACCAGATCCAGAAGAAGGATGTAGGAGGAGTAGGTCGAAAGTTATTAGAGAGTTCATGGTTATTGCGTGGCAACAACAAGTTTAAGTCAAAGTTGAAGAAAGAGAATAAAGTGTGTGCTGTTTGCCTAGAGGATTTCGGACAAGAAGAGCAACATGCGGCGGTTATGAACCTGTCATGCTCCCATAAGTACCATTCTGCATGCCTTCTTCCCTGGCTTGCAGCCCATCCCCATTGCCCCTATTGTCGAACCCCAGTCATTCTCAACACTTGA 555 0.4378 MAGRLPGVGLLARKRTEQNHSRYQHQHQHQHQHQHFSFNNNNRDSSSLTVSVSVLDETALKARQRLHKKLGHFFSSYRSNENPRKEEGKVSESRYQIQKKDVGGVGRKLLESSWLLRGNNKFKSKLKKENKVCAVCLEDFGQEEQHAAVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVILNT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2169 184 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 32 179 - -
Aed1g2169 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 181 IPR013083 -
Aed1g2169 184 SUPERFAMILY RING/U-box 124 182 - -
Aed1g2169 184 MobiDBLite consensus disorder prediction 17 43 - -
Aed1g2169 184 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 32 179 - -
Aed1g2169 184 ProSiteProfiles Zinc finger RING-type profile. 133 177 IPR001841 -
Aed1g2169 184 SMART ring_2 133 176 IPR001841 -
Aed1g2169 184 CDD RING-H2_PA-TM-RING 132 177 - -
Aed1g2169 184 Pfam Ring finger domain 132 177 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2169 127 177 C3H Transcription Factor Family AT3G58720 43.137 2.65e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2169 - - gmx:100527548 231.491