Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2168 ATGGGGAAGACAGGCAAATGGCTTAGAAACTTGTTGACAGGTAAGAGAGACAAGGAAAAGGAGAAGGAGAAATCTACAACCAACCTGAATTCTTCTTCAAATGGAACAGAAAACTCAACCACTCCAACAACTTCCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGGTCATCAGCCTCAGCCACAGCCACACCAACATCAACTTCCAAGGAATTGAATTTTGTAGAACAAAATGTGACTGCTTCACAGACAGTGCAAACTGACACAGATATTCAGAATGATCAGCAGAGGAAGCATGCCATGGCTGTGGCTGCTGCCACTGCAGCAGCAGCTGATGCTGCAGTGGCAGCTGCTCAGGCTGTAGCTGCCGTGATCCGTTTGACTTCTGCTTCCAATGGAACATCTAAAAGCTTTGAAGAGCCTGCTGCCATTAAAATCCAATCTGCCTTTCGCTCTCACTTGGCAAGGAAAGCATTGTGTGCTCTTAGAGGAATAGTTAAGTTGCAGGCACTTGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGCAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAGAGGATCCTAATAGGGTCAGAAGGAAAACCCAACCAAAAGCACAGAAATGCTGCAGAAGATGATTTGCTCAGGCATATATATAATGAAATGGACAGAGGCTTGGAAGACAACATCAAGATTGTAGAGATGGATGTTTGTGAATCAAAAGGCAACTCCAGAAGCAGAAGCAGCAGTGTATATCAATATCATCATGGACATCAAGAACAATATGACAACAGATTTCCCACACATTATTCAATAAATGGTTCCTACACAAAAGAAGAAAACTACAAGGTATCACCAGCTCCATCAGCATTGACAGAGTTGAGTCCAAGAGCCTGCAGTGGCCATTTTGAGGACTCTTTCAGCACAGCACAAAGCAGCCCTCACCCTCAGTTCTACTCTGCAGTGTCAAGATCAGAAGATTCAAAGCAGCACCCTTTTGCTTTCCCTAGGTCAGCAGCTTATGCAGAATCTATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGTCAGATCACACAGTGCACCTAAACAAAGGCCAGATTCATTTGAGAGGCAACCGAGCCGGCGAAGAGCTTCGGTTGAGGGAAGAAATGTCCCAAGGCCAATGAGGATGCAGAGATCATCTTCACATGTGGGTGCCACTGCCCATAACTACCATTATCCTTGGTCAATCAAGCTTGATAGATCAGCAGTTTCACTCAAAGATAGTGAGTGTGGCTCTACAAGTACAGTGCTCACTAACAATAATTATTGCAGATCTCTTGTTGCATATGACGTGAGTACTTACCAATTACCATCTCTCATACCACAAGTTCTTTTTATCAAAAAAGTTGAATACTAG 1464 0.4433 MGKTGKWLRNLLTGKRDKEKEKEKSTTNLNSSSNGTENSTTPTTSTTPKEKKRWSFRRSSASATATPTSTSKELNFVEQNVTASQTVQTDTDIQNDQQRKHAMAVAAATAAAADAAVAAAQAVAAVIRLTSASNGTSKSFEEPAAIKIQSAFRSHLARKALCALRGIVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRILIGSEGKPNQKHRNAAEDDLLRHIYNEMDRGLEDNIKIVEMDVCESKGNSRSRSSSVYQYHHGHQEQYDNRFPTHYSINGSYTKEENYKVSPAPSALTELSPRACSGHFEDSFSTAQSSPHPQFYSAVSRSEDSKQHPFAFPRSAAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPMRMQRSSSHVGATAHNYHYPWSIKLDRSAVSLKDSECGSTSTVLTNNNYCRSLVAYDVSTYQLPSLIPQVLFIKKVEY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2168 487 MobiDBLite consensus disorder prediction 1 74 - -
Aed1g2168 487 Pfam Protein of unknown function (DUF4005) 339 404 IPR025064 -
Aed1g2168 487 PANTHER IQ-DOMAIN 5-RELATED 1 449 - -
Aed1g2168 487 Pfam IQ calmodulin-binding motif 144 161 IPR000048 GO:0005515
Aed1g2168 487 Pfam IQ calmodulin-binding motif 165 184 IPR000048 GO:0005515
Aed1g2168 487 SMART iq_5 140 162 IPR000048 GO:0005515
Aed1g2168 487 SMART iq_5 163 184 IPR000048 GO:0005515
Aed1g2168 487 MobiDBLite consensus disorder prediction 58 74 - -
Aed1g2168 487 MobiDBLite consensus disorder prediction 10 26 - -
Aed1g2168 487 MobiDBLite consensus disorder prediction 374 419 - -
Aed1g2168 487 ProSiteProfiles IQ motif profile. 165 192 IPR000048 GO:0005515
Aed1g2168 487 MobiDBLite consensus disorder prediction 377 404 - -
Aed1g2168 487 MobiDBLite consensus disorder prediction 27 49 - -
Aed1g2168 487 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 449 - -
Aed1g2168 487 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
Aed1g2168 487 Gene3D - 141 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2168 Aed-Chr1 18109313 18111453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2168 1 472 IQD Protein Family AT4G14750 42.972 1.45e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2168 - - gmx:100817667 704.516