Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2167 ATGGCCTCTCATTCTCCCAATAGAGGAGAAGGCCCTTATCTTAATATTGTACTACTATTCATTGCCATAATTTTCATCTCCATCATCAACCCCTCACACCAAGATGAGTACTCTTCTTCCCCTCTACCCTCTCTAAACCCAAGACTCACCAAAGCCTACACTGCACTCCAAGCATGGAAACACAAAATCACCTCAGACCCAAAAAACTTCACCCTAAACTGGTGTGGCCCCAATGTTTGCAACTACACTGGCATATTCTGTGCACCAGCCCCAGACGATCCTCACATCTACACCGTTGCTGGAATTGACCTAAACCACGCAACCATATCAGGTTCATTGCCTGAAGAACTTGGTCTCTTAACCGACCTAGCACTTCTCCACATAAACTCCAACCGCTTCTGTGGTTCTCTTCCCAACAGCTTCGAGAAACTTCAGCTCCTCCACGAACTAGACATCAGCAACAACCAATTCTCGGGTCCATTCCCCGAGGTTGTTCTTTGCATCCCTTCGTTGAAGTTCTTGGACATCAGATTCAACAGCTTCCACGGCAGCGTTCCCTCGCGCCTCTTCGAAGCACTCAAACTCGATGCCCTCTTCATCAACAACAACAACTTCTCGTTCTCGTTGCCCGAGAGTTTCGGGAACAGCACTGCCTCTGTTGTCGTGTTCGCGAATAATGACCTTAGAGGGTGTCTTCCTTCGAGTTTGGTTCAAATGAAGGGTACCCTTAACGAGATTATAATCACCAACAGTGGCTTGACGGGTTGTTTGCCTAGTGGGATTGGGGAATTGGAGAATGTGACTGTGTTTGATGTGAGTTTTAATAAGTTGGTTGGGGAATTGCCTGAGTCGTTGGGGAGAATGAAGAGGTTGGAGCAGCTGAATGTGGCGCATAATATGTTGTCTGGTGATATTCCTGAGAGTGTTTGCATGTTGCCGAGGTTGGAGAATTTCACGTACTCTTATAACTACTTCTGCAGTGAGTCACCGGTTTGTCTCAAGTTGAAGGCTGAGGATGATGCCAAGAATTGTATTCCTTATAGGCCATTGCAAAGGTCACCTCATGAGTGTAAGGCTTTTTATGCACATCCTGTACATTGTAGTGACTTTGGTTGTGCATCGCCGCCTCCTCCTCCTCCTCCTCCGCCACCACCACCTACTCCTCCTCCACCGCCACCACCATCTTACCACCACTATCCGTAA 1203 0.4763 MASHSPNRGEGPYLNIVLLFIAIIFISIINPSHQDEYSSSPLPSLNPRLTKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIFCAPAPDDPHIYTVAGIDLNHATISGSLPEELGLLTDLALLHINSNRFCGSLPNSFEKLQLLHELDISNNQFSGPFPEVVLCIPSLKFLDIRFNSFHGSVPSRLFEALKLDALFINNNNFSFSLPESFGNSTASVVVFANNDLRGCLPSSLVQMKGTLNEIIITNSGLTGCLPSGIGELENVTVFDVSFNKLVGELPESLGRMKRLEQLNVAHNMLSGDIPESVCMLPRLENFTYSYNYFCSESPVCLKLKAEDDAKNCIPYRPLQRSPHECKAFYAHPVHCSDFGCASPPPPPPPPPPPPTPPPPPPPSYHHYP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2167 400 MobiDBLite consensus disorder prediction 374 400 - -
Aed1g2167 400 Gene3D Ribonuclease Inhibitor 219 346 IPR032675 -
Aed1g2167 400 SUPERFAMILY L domain-like 53 332 - -
Aed1g2167 400 Gene3D Ribonuclease Inhibitor 52 218 IPR032675 -
Aed1g2167 400 Pfam Leucine rich repeat N-terminal domain 54 87 IPR013210 -
Aed1g2167 400 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 22 379 - -
Aed1g2167 400 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2167 Aed-Chr1 18103076 18104278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2167 43 379 Leucine-rich Repeat extension Gene Families AT3G22800 66.568 1.97e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2167 - - gmx:100818195 635.95