Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2162 ATGAATTTTAGAGCAGATAAAATTGATTTGAAGAATTTGGATGTGATGCTAGAAAAACACTTCAGCAGGATTTTTTCCAAAAGCATCGAGTCCAAAAGGCCTAAAGAGGCATGGGAGATTCATTTGGCCAAACTAGATTTACAATATTCTTTAGCTAACGGGGCATATGGTACTGTCTACAAGGGTACTTATGACACTCAAACTATTGCAGGTGAGAATGGTGTTGCCACTACTACTGAAATTGTTGCTTTACGAGCATCATTTTGGCAGGAGGTTACTGAATGGCAAAAACTTGATTATCCAAATGTCACAAAAATTCCCTTACCAAGCAATGGTCAAAATTCTCTTCCTTCCAAGGTGTGTTGTGTTATTGCTGGGTTTCTTCCTGGATGTGATTTAGCTGGCTTTGGACCTCTCAAGAGGTCTTTGTTATCTACATCCAAAGAATATTGTTCATCACGATATAAAATTGAAAATATATTGTTAGATGCCGATCAAAATTTGAAAATAGTTGATTTTGAAGTTGCTTGA 531 0.3653 MNFRADKIDLKNLDVMLEKHFSRIFSKSIESKRPKEAWEIHLAKLDLQYSLANGAYGTVYKGTYDTQTIAGENGVATTTEIVALRASFWQEVTEWQKLDYPNVTKIPLPSNGQNSLPSKVCCVIAGFLPGCDLAGFGPLKRSLLSTSKEYCSSRYKIENILLDADQNLKIVDFEVA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2162 176 Gene3D Phosphorylase Kinase; domain 1 27 108 - -
Aed1g2162 176 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 122 - -
Aed1g2162 176 SUPERFAMILY Protein kinase-like (PK-like) 29 174 IPR011009 -
Aed1g2162 176 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2162 Aed-Chr1 18062541 18063562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2162 1 176 MAP Kinase Kinase Kinase AT3G22750 47.664 1.20e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2162 - - gmx:100807899 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2162 1 18062541 18063562 Aed11g1883 11 21799890 21803849 PCT