Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2129 ATGAATGGTGCTGCATGTGTTGAGGCAGAGTGCTGTGAGTTTGTGGAAGTTGATCCCACGGGAAGATATGGCAGATACAATGAAATTCTCGGGAAAGGAGCTTCCAAGATAGTCTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGCTATACAGTGAAATTCATCTCCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATATTTCCTGGGTTGATACTGCCAACAGACACATTAACTTTGTCACTGAGATGTTTACCTCTGGGACTCTAAGACAGTACAGACTTAAACACAAACGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTTCTTTATCTGCATAGCCATGATCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGCGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAACGCTGCTCGCTGTGTTGTTAAGACTCTTGATTTGCCTTTTTTTTTTCTTCCTTGTTTTACTCAAGGCACACCTGAGTTTATGGCTCCTGAAGTATATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACTTTTGAATATCCTTATAGTGAATGCATCCATCCTGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAACCAGAAGCTCTTTACAAAGTAGACAATCCTGAGGTTAGGCAGTTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCTAAGGAACTCTTGGATGACCCTTTTCTCCAAATTGATGATTATGGATTTGACTCAAAAGTAGTGCAGTATCAAAGAGATTGCTATGAAGTAGCCCCACCTTTGAATGGAATTTATAGCATTAACAACAACTTAATTAGTGGGTACACTGATAATATTGGTGGTTATGGACCTACATCTGAATTGGATTATCATCAAGACGATTTTGAAGCGAGTGAAATTGGTCTCTTTGATTTTGAAGAGGTTGACAATTTGGCTGAAGTTGACACCACAATCAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTTTGAGACTCAGAATAGCAGATAAGGAAGGTCGAATTAGAAACATCTACTTCCCATTTGACATTGAGACTGATACCGCATTGAGTGTTGCAAATGAAATGGTAGCTGAGCTTGACATAAATGACCAAGATGTAACAAATTTAGCAAATATGATAGACAGTGAAATTGTAACATTGGTTCCAGAGTGGAAAACAGGACCAAGAATAGAGGAAAAATCAGAATGCTCAAGTGCAAGTGTCTGCCTCAATTGTGCTGCAAACGGTTCCTTGGTTGATTATGTATCGTCAAATAATAATCCATGTCGCAAAAACCTTCAATTTCTTCATTGTTCTAAAACTGGATGTGCTGCAGTTCATGGCCGATTTGAAGAGATAACATACCAAGTTGATGATGGGTCTGAAAATAGTGCTAGAGAAGGTGCACCAGATGCACCAAGCCAATCCAATGGCATTCAATATACAGATATCTGGGCTCAGAGAGATGAACCAGAGTTATGCCATGAAGAGTTAAAAGACATACACTGTGACCAAGCTCATGAGGCATCAAACATCAAGGAGGATGGAAAAACTGTTAATGTGGATGATGAACAAAGTGATCTCAATACCAGAAAGCCTTCGTCAGACCCTGCACCAAATTGTGTTATCTTGGACTATGAAAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAACAACTAGGGGTTAAACCAAAATTTACTAGCATATCTCCTGACACCGAAAACTTGGAGCATTTGAAAGATGGAATTCGGAGGCTATCAGATACATCCAACTTGAAGATACAACAAACCCATAAACCATTATTGAGAACTATAGTTTCTGGGAAGCATTTTCATGTTGAAGCTGATAAATACAACATTTTGGCTGATCAAATGGTTCAAAATGTTGATGAGATTCGTCAGTCTAACAGTCCTGAGCAAATGTTCACAGCCAAGGATTTCTTTACAGGACTATTGCTTCCACACTCTCCGCTTCAGAGGGCAACCTCACTTCCTGTTGATGCAGTAGATGTCTAG 2238 0.3963 MNGAACVEAECCEFVEVDPTGRYGRYNEILGKGASKIVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYISWVDTANRHINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVVKTLDLPFFFLPCFTQGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECIHPAQIYKKVVSGKKPEALYKVDNPEVRQFVEKCLATVSLRLSAKELLDDPFLQIDDYGFDSKVVQYQRDCYEVAPPLNGIYSINNNLISGYTDNIGGYGPTSELDYHQDDFEASEIGLFDFEEVDNLAEVDTTIKGRRREDDGIFLRLRIADKEGRIRNIYFPFDIETDTALSVANEMVAELDINDQDVTNLANMIDSEIVTLVPEWKTGPRIEEKSECSSASVCLNCAANGSLVDYVSSNNNPCRKNLQFLHCSKTGCAAVHGRFEEITYQVDDGSENSAREGAPDAPSQSNGIQYTDIWAQRDEPELCHEELKDIHCDQAHEASNIKEDGKTVNVDDEQSDLNTRKPSSDPAPNCVILDYENEIRQELRWLKAKYQMQLRELRDQQLGVKPKFTSISPDTENLEHLKDGIRRLSDTSNLKIQQTHKPLLRTIVSGKHFHVEADKYNILADQMVQNVDEIRQSNSPEQMFTAKDFFTGLLLPHSPLQRATSLPVDAVDV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2129 745 Pfam Protein kinase domain 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2129 745 Gene3D - 388 475 - -
Aed1g2129 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Aed1g2129 745 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Aed1g2129 745 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 733 - -
Aed1g2129 745 Coils Coil 612 632 - -
Aed1g2129 745 CDD STKc_WNK 22 297 - -
Aed1g2129 745 ProSiteProfiles Protein kinase domain profile. 24 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2129 745 MobiDBLite consensus disorder prediction 570 591 - -
Aed1g2129 745 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 733 - -
Aed1g2129 745 SMART serkin_6 24 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2129 745 MobiDBLite consensus disorder prediction 570 600 - -
Aed1g2129 745 Gene3D Transferase(Phosphotransferase) domain 1 107 302 - -
Aed1g2129 745 SUPERFAMILY Protein kinase-like (PK-like) 18 298 IPR011009 -
Aed1g2129 745 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 390 445 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2129 Aed-Chr1 17844835 17849872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2129 1 528 MAP Kinase Kinase Kinase AT3G22420 58.169 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed1g2129 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2129 K08867 - gmx:100804179 1312.36