Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2101 ATGCAAGACTTTTTGGGCTCCCTTCGCCGCTCCCTGGTTTTCCGACCCGGCGGTGACGATGGACCATTTGCCGGAATCACCGACAAGCTTGGCTCCGCCATTCGCAAATCGCGAATCGCACTCAAACCGCCTACTCCTCCAATACGGTGGCGCAAGGGCGAGTTGATCGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGACTCCGGAGAGCTTATTGCCATCAAACAGGTTTTAATTGCACCTGGTAACGCATTCAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAATCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACCTGGGAACTGCTAGAGAGGAGGATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGATCTATCTCATCGCTCTTGGGGAAATTTGGATCCTTCCCCGAATCCGTTATAAAAATGTATACAAAACAGCTTTTACTGGGCCTTGAATATCTTCACAATAACGGAATTATTCACAGGGATATTAAGGGTGCCAACATTCTAGTTGATAATAAAGGGTGCATTAAACTCGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACCATCAATGGTGCAAAGTCAATGAAGGGTACAGCACATTGGATGTCTCCTGAAGTTATTTTACAGACAGGACATACAATCTCTACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCGCAGGAGGTTTCAGCTATTTTCTATATCGGGACAACTAAATCTCATCCTCCCATACCTGAACATCTGTCTGCTGAGGCAAAGGACTTTTTGCTGAAGTGCTTCCATAAGGAACCAAATTTAAGGCCTTCTGCATCAGAATTGTTGCAGCATCCGTTCATCACCTGCGACTATCATGGATCTCATTCAATATTATGCAGTTCAATCAGGGACTCTTGCAATAAGATGGCAACATATGGGATGAACTCTAGAAACTTCTTGGATTCTGTCCAGGGATCAACTTGTACAGGCTTAAAGGATGTTTGTCAGATAGATAGCATACAGTTCTCAACTGTATATCATAAAGCAGATTCCTATAAAAGAGCAGACAGCAATGATGATGACATGTGTCAGCTGGATGAAGATGATTTTTTGATTGATTCATCAGTAAAATCTGAATTGCTATTGGCTTCTGATGATATGAAGAGTTTCAATCCTATGTGCAAACCTTTGGATGACCGACCTTGCAATTTTGATGAAACCCAATATTTGGAGAAAAGCAGACCAAACTTGTCATTTCCAAGTGAGCCTCTAGGAACTGAAGATGATGATGAAGTTACTGAGTGTAAAATTAGAGCCTTCCTGGATGCTAAGGCTCTTGAACTGAAGAAGCTCCATACACCTCTTTATGAAGAATTCCGTAGCATATCAAATGCAGCCATTGCTCCTGCTCCCATTGGAGTTGTAAAGAGCAAAGTTATGTTGGATGACTCAAATGTAACATCATCAAAAGCCAGGTCTCCTAGTCAGGCTTGGAGACGATTCTCAATGGTTGGCAGGGCTAATGTTCCAAGCCCTGGGAGTCATGCCAAATACCGATCAAAGCTTAGTGGTGCTCAATGTCGACCTTTGCAGGAAATTCAGCCATCTGGGCTTAATGAATCAAAGGAAACTCTTCATGATGCTGAGCTGGAATCATCTAGTGTAAGCTCAAGCTTCTCCGAGAGGCAAAGGAAATGGAAAGAAGAATTGGCTGAAGAGCTTGAGTGGAAGCGAGGCATGTATGAGGACTGGTTTATTTTTCCATTTAGAATATAG 1854 0.4337 MQDFLGSLRRSLVFRPGGDDGPFAGITDKLGSAIRKSRIALKPPTPPIRWRKGELIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGNAFKENTQANIRELEEEIKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTAHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSAIFYIGTTKSHPPIPEHLSAEAKDFLLKCFHKEPNLRPSASELLQHPFITCDYHGSHSILCSSIRDSCNKMATYGMNSRNFLDSVQGSTCTGLKDVCQIDSIQFSTVYHKADSYKRADSNDDDMCQLDEDDFLIDSSVKSELLLASDDMKSFNPMCKPLDDRPCNFDETQYLEKSRPNLSFPSEPLGTEDDDEVTECKIRAFLDAKALELKKLHTPLYEEFRSISNAAIAPAPIGVVKSKVMLDDSNVTSSKARSPSQAWRRFSMVGRANVPSPGSHAKYRSKLSGAQCRPLQEIQPSGLNESKETLHDAELESSSVSSSFSERQRKWKEELAEELEWKRGMYEDWFIFPFRI 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2101 617 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Aed1g2101 617 CDD STKc_MAPKKK 49 313 - -
Aed1g2101 617 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2101 617 PANTHER MAP KINASE KINASE KINASE 35 522 - -
Aed1g2101 617 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2101 617 Coils Coil 90 110 - -
Aed1g2101 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Aed1g2101 617 Gene3D Transferase(Phosphotransferase) domain 1 49 344 - -
Aed1g2101 617 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2101 617 MobiDBLite consensus disorder prediction 566 589 - -
Aed1g2101 617 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Aed1g2101 617 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 35 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2101 Aed-Chr1 17618915 17623466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2101 1 592 MAP Kinase Kinase Kinase AT3G06030 55.346 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed1g2101 Pkinase 3.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2101 - K20606 gmx:100795863 1089.33