Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2095 ATGTATAACAGTATTGAAAACACAAACGCGCTCGATGAAATGTTAACACAAAGGAGATCGGGCTCGGAGAATGATTTGGCTACAAACAGTAGATCAGACGAAGAACCTAATTCTGCGGGCAGGGACAACATGAGCATGGAAGCTCCTCCTTCCGGTGACGAGGGGGATCCCAACGAAGGATCACAAAGAAGGCGCTACAACCGCCACACACAGCACCAAACTACGGAGCTGGAATTATTCTTCAAGGAGTGCCCTCACCCTGATGACAAGCAAAGGAAAGCACTGGGCCGCGAACTCGGGTTGGAGCCTTCACAAATTAAATTCTGGTTCCAAAACAAGCGCACACAGGTTAAGTCGCAGCAGGAGCGCTATGAAAACAATCTCCTCAAGGCTGAAAATGATCAGCTGCGTGGCGAAAACAACAAATACAAGAATTCACTAGCTCTGAATTCTTGCCGTAGCTGTGGAGCCTGCAGTCCTCATGGAGAAATGTCCTTTGATGAACAGCAGTTAAGGATCGAGAATACGCAATTAAAAGAGGAGATTCAAAGGATGTCCAGAATTATAGCCGAGTGTTCTGGAAATGATCATGACGATTCATCATCTGAAAACCAGATGTCTTGGAATTCGCTGTCGCTTGATCTGGGAGTTGGCAATGGCGACAACTATGGAGCACAAGCTGCCGCTGAAGCTGAAGCGAAAGCGGCGCAAGCTCGCGCTGAAGCGGCGCAAGCTCACGCAGAAGCACTGCAGGCACAAGCAGTGGTGGTGATCGGTGAAATGCATGATGTGATTAACCCTCTTAGGCAGCTCCCGCTTCTTTCTAGTTTTGACAGATCCTTAATTCTGGAGATTGGTGCTGTGGCAATGGAAGAGCTGAATCAATTGTCTATGTATGGAGAACCTTTGTGGGTCCCTGGCAAATTCGGCAGTGATGTTATAAATGAAGATGAATACCTGAGGCGTTTCCCCAGGGGAATAGGTCCAACACTCCATGCTGCTTCAAGAACTGAATCTTCGAGGCACTCCGCAGTTGTCACCATGAATCATATGACAATCGTAGCGATCCTTATGAATGTCAACCAATGGTCAAACGTGTTTTGCGGCATCGTTTCAAAGGCAGTGACACACCAAGTGCTGTCACCTGGAGAAGAGGAAAGATACGATGGAGCCTACCAAGTGATGTCAGCTGAGTTCCAGGTTCCTTCACCCTTTGTTCAAACCCGTGGCAACTATTTCATCAGGTACAGCAAGAAGCAGCGAGGGGAATCATGGGCGGTGGTTGATTTCGCCATGGATTACCTGCGACCCAGTGCAGCCACAAGAACCCGAAGACGACCCTCTGGCTGTATCATTCAAGAACTGCCCAATGGGTACTCCAAGGTCATTTGGGTAGAACATGTGGAACTGGACGCCAGCGTCGTCCAAGGTCTTTACAGAAATTTGGTTAATTCTGGGCTTGCATTTGGAGCTAAACGTTGGGTGGGAGTATTACATAGACAATCGGAACGTCTTGCTAGTGCAATGGCCACCATCACACCCCAAGATGACCATTCTGTGATAAGAAGTAACGAGGGAAGGAAAAGTGTGTTGCGGCTGGCTGAAAGAATGACTTTGAGATTTTCTACTGCTGCTGGTGCATCCATTGCAGATTATTGGACACCAATACCAGTTGCTGGTATTGAAGATGTAAGGATCATGATCAGAAAGAGTAGTATTAATGATCCAGGCAGACCTCCCGGTATAATCCTCAGTGCTGCATCTTCTATTTGGATTCCAATTCCTGCAAGGACAGTTTTTGAGTTTCTGAGTTCCGAACACTCCAGAAATCAGTGGGACATTCTTTCGAGTGGTGGTCAAGTGGTGAAGATTGCACACGTTTCTAACGGGCGTGACCCTGGGAATTACGTCTCTGTGCTTCGTGTGGTTCCTGGGAATGACAACAACCCGAGCACAATGCTGTTGCTTCAAGAGAGTTTCAGTGATGCTACAGGCTCATTTGTGGTGTATGCACCAATTGATTTAGCTTCCCTGAATGCTCTGTTGGATGGTGCTGATCCGGATTATGTGCCCCTGCTGCCATCGGGCTTTGTTATTCTTCCTGATGGGCCTGGGCCTTACACAGGGCCCATATGTGAGGTTGGATCTGGAGGAGGTTGTCTTCTCACCGTTGCTTTTCAGATACTGGTAAATTTGGTTCCAACTGCCTCACTAGATCTTGCTTCGGTGTACGCCCTTAACAACTTAATCAAGACCACACTTGAACGGACCAAAATTGCGTTGGGGCTGCTTGAGGTCACCTAA 2304 0.4787 MYNSIENTNALDEMLTQRRSGSENDLATNSRSDEEPNSAGRDNMSMEAPPSGDEGDPNEGSQRRRYNRHTQHQTTELELFFKECPHPDDKQRKALGRELGLEPSQIKFWFQNKRTQVKSQQERYENNLLKAENDQLRGENNKYKNSLALNSCRSCGACSPHGEMSFDEQQLRIENTQLKEEIQRMSRIIAECSGNDHDDSSSENQMSWNSLSLDLGVGNGDNYGAQAAAEAEAKAAQARAEAAQAHAEALQAQAVVVIGEMHDVINPLRQLPLLSSFDRSLILEIGAVAMEELNQLSMYGEPLWVPGKFGSDVINEDEYLRRFPRGIGPTLHAASRTESSRHSAVVTMNHMTIVAILMNVNQWSNVFCGIVSKAVTHQVLSPGEEERYDGAYQVMSAEFQVPSPFVQTRGNYFIRYSKKQRGESWAVVDFAMDYLRPSAATRTRRRPSGCIIQELPNGYSKVIWVEHVELDASVVQGLYRNLVNSGLAFGAKRWVGVLHRQSERLASAMATITPQDDHSVIRSNEGRKSVLRLAERMTLRFSTAAGASIADYWTPIPVAGIEDVRIMIRKSSINDPGRPPGIILSAASSIWIPIPARTVFEFLSSEHSRNQWDILSSGGQVVKIAHVSNGRDPGNYVSVLRVVPGNDNNPSTMLLLQESFSDATGSFVVYAPIDLASLNALLDGADPDYVPLLPSGFVILPDGPGPYTGPICEVGSGGGCLLTVAFQILVNLVPTASLDLASVYALNNLIKTTLERTKIALGLLEVT 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2095 767 CDD homeodomain 63 121 IPR001356 GO:0003677
Aed1g2095 767 CDD START_ArGLABRA2_like 279 503 - -
Aed1g2095 767 SUPERFAMILY Bet v1-like 339 506 - -
Aed1g2095 767 ProSiteProfiles START domain profile. 275 507 IPR002913 GO:0008289
Aed1g2095 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 30 762 IPR042160 -
Aed1g2095 767 Coils Coil 114 146 - -
Aed1g2095 767 SMART START_1 284 504 IPR002913 GO:0008289
Aed1g2095 767 Gene3D - 52 134 - -
Aed1g2095 767 Coils Coil 226 253 - -
Aed1g2095 767 Pfam START domain 289 504 IPR002913 GO:0008289
Aed1g2095 767 SUPERFAMILY Bet v1-like 525 756 - -
Aed1g2095 767 SUPERFAMILY Homeodomain-like 44 121 IPR009057 -
Aed1g2095 767 Coils Coil 168 188 - -
Aed1g2095 767 MobiDBLite consensus disorder prediction 1 64 - -
Aed1g2095 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 30 762 - -
Aed1g2095 767 Pfam Homeodomain 63 118 IPR001356 GO:0003677
Aed1g2095 767 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Aed1g2095 767 SMART HOX_1 62 124 IPR001356 GO:0003677
Aed1g2095 767 MobiDBLite consensus disorder prediction 1 34 - -
Aed1g2095 767 Gene3D - 337 501 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2095 Aed-Chr1 17582726 17586715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2095 14 762 Homeobox Transcription Factor Family AT4G21750 51.866 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed1g2095 START 2.6e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2095 K09338 - gmx:100793758 884.019