Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2074 ATGGCTTCGTATCACAAATATGTCATACCTTTTATATTTTTTATATCCCTCGGTTTTAGTGAGACTAGAGCACAGGGCGTTACTTTTCAGTACAAAGTTTGCTCACCAGAGAATTTTGTTCCAAATAGCACCTACCAAAGCGACCGCAAAAGCCTCTTCTCTTCCTTATCTTCTAAAGCCTCCAGCAATATCGAATTCTTCAACAACACCGTGACGGGGACGACAAGTCCCTCCTCCGATACAGTATGCGGACTATTCATGTGCAGGGGTGACATCCCCTCGGAGCTATGTAATCAATGCGTCGGAAACGCAACCCAGCTACTATCCACACACGAAGACTGCTCCTTGTCCAAAGAAGCAGTGGTGTTTTACGACGAGTGCATAGTTCGGTACTCCAACAGCCCTTTCTTCTCCACCGTAACCATGGATGACGGCTATGCCCTGTGGAACCCCACCAATATGACCAACCAAAAAAGCTTCGAGCGTTTACTCTATGACACCATGAATGAAACTTCGGATGACGCAGCCAAATCACCTATTGGAGCTAAAAAGTTCGCCACAAAGGAAACAAACATAGATATATTTCAAAAGCTTTATTGTCTTGCTCAGTGCACACAAGACCTGTCCCCCCAAGATTGCAGAAGCTGTCTGGATAGTTTGATCAACTCGGATCTGCCACGGTGTTGTGCAGGAACGCAGGGAGGAAGAGTTTATTATCCCAACTGCATCATCAGGTTTGAAATTTACCCTTTTTTTCGATCCCTTTCCTCGGCACCAGCGCCAACACCGGCAGGACTAGTTCCTGTTCCTGCAGCCAAATCAGGAGGAGAAAATAAAAAGAGTAGATCACGAACCATTATTTTAATTGTTGTCCCCATTGTTATTTTGGTGACCCTCGTTACTTTGTGCTACTATTTGCTAAGGAGAAGAGCAAGAAAGAGTCCTAAGATCCTTCTTAGAGAAAATTTTGGTGAAGAAAGTTCCATTCTAGAAGGGTTGCAATTTGATTTGGCAACCATAAAACTAGCCACAAATAATTTTTCACAGGAGAACAAGATCGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTTCTGATGGACGACATATAGCTGTTAAAAGACTTTCAACAAGTTCTAAACAAGGTTCTGCCGAGTTTAAGAATGAAATTTTATTAATAGCCCAGCTACACCATAGAAATCTGGTGGCATTCATAGGATTTTGCTTAGAAGAACAAGAAAAGATTCTCATTTATGAATATGTGCCAAATCGTAGCCTCGACTACTTTTTATTTGAATATGCAATGTTTGGACAATTTTCTGAAAAGTCAGATGTTTTTAGTTTTGGAATCATGATTCTTGAAATTATTACTGGTAAAAAAAATGCAAGTTCTTATGAATCACACCAAATTGAGGAAGGACTTATGACTTATTCTATTTCCTTCCATTTCTTTTATTTTTATTTGTATAATTTCATTGCAAGTTCCTCTTTTGATAACTTTGATTGTTTTGTCAAAATTTATCCTTTAGGCACCCCTAAACGCCAAAATTTATGCCAGCTAGCTGGAGGACTAATTGTAGGCCATTAA 1593 0.4018 MASYHKYVIPFIFFISLGFSETRAQGVTFQYKVCSPENFVPNSTYQSDRKSLFSSLSSKASSNIEFFNNTVTGTTSPSSDTVCGLFMCRGDIPSELCNQCVGNATQLLSTHEDCSLSKEAVVFYDECIVRYSNSPFFSTVTMDDGYALWNPTNMTNQKSFERLLYDTMNETSDDAAKSPIGAKKFATKETNIDIFQKLYCLAQCTQDLSPQDCRSCLDSLINSDLPRCCAGTQGGRVYYPNCIIRFEIYPFFRSLSSAPAPTPAGLVPVPAAKSGGENKKSRSRTIILIVVPIVILVTLVTLCYYLLRRRARKSPKILLRENFGEESSILEGLQFDLATIKLATNNFSQENKIGKGGFGEVYKGILSDGRHIAVKRLSTSSKQGSAEFKNEILLIAQLHHRNLVAFIGFCLEEQEKILIYEYVPNRSLDYFLFEYAMFGQFSEKSDVFSFGIMILEIITGKKNASSYESHQIEEGLMTYSISFHFFYFYLYNFIASSSFDNFDCFVKIYPLGTPKRQNLCQLAGGLIVGH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2074 530 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 272 433 - -
Aed1g2074 530 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 434 480 - -
Aed1g2074 530 Pfam Protein tyrosine and serine/threonine kinase 349 432 IPR001245 GO:0004672|GO:0006468
Aed1g2074 530 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Aed1g2074 530 Pfam Salt stress response/antifungal 34 133 IPR002902 -
Aed1g2074 530 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Aed1g2074 530 ProSiteProfiles Protein kinase domain profile. 347 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2074 530 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 257 - -
Aed1g2074 530 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 434 480 - -
Aed1g2074 530 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Aed1g2074 530 Gene3D Phosphorylase Kinase; domain 1 313 418 - -
Aed1g2074 530 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 257 - -
Aed1g2074 530 SUPERFAMILY Protein kinase-like (PK-like) 326 485 IPR011009 -
Aed1g2074 530 Gene3D Transferase(Phosphotransferase) domain 1 419 485 - -
Aed1g2074 530 Gene3D - 26 136 IPR038408 -
Aed1g2074 530 Gene3D - 144 251 IPR038408 -
Aed1g2074 530 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 272 433 - -
Aed1g2074 530 ProSiteProfiles Gnk2-homologous domain profile. 27 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2074 Aed-Chr1 17455522 17460772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2074 430 479 Receptor kinase-like Gene Family AT4G05200 54.000 7.93e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g2074 Stress-antifung 1.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2074 - - vun:114191422 659.448