Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2073 ATGATGTTGTCATTATTTTCAAGAACTTATCTGCAAAGTCTTTTAGGATATAACATGCTCATCCTAACAATGGTTGGAGCAACAAAATTAGTGAACTTTTTAAACGAGATAGTGTTGATAGCCAAGCTACAACATAGAAATCTTGTGACATTTATAGGATTCTGTTTAGAAGAGCAAGAGAAGATTCTCATTTATGAATATGTGCCAAATCGTAGTCTGGATTACTTTTTATTTGAATATGCAATGTTTGGACAATTTTCTGAAAAGTCAGACGTTTTTAGTTTTGGAATTATTGTTCTTGAGATTATCACCGGTAAAAAGAATGTAAATTCCTATGAATCACACCACAATGACAAAGGCCTTATGACTTATGTAAGTGTGATAATTTATCATTATATAACTAAGAAATTTGATTAA 417 0.3022 MMLSLFSRTYLQSLLGYNMLILTMVGATKLVNFLNEIVLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNRSLDYFLFEYAMFGQFSEKSDVFSFGIIVLEIITGKKNVNSYESHHNDKGLMTYVSVIIYHYITKKFD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2073 138 Pfam Protein tyrosine and serine/threonine kinase 29 77 IPR001245 GO:0004672|GO:0006468
Aed1g2073 138 Pfam Protein tyrosine and serine/threonine kinase 79 113 IPR001245 GO:0004672|GO:0006468
Aed1g2073 138 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 78 - -
Aed1g2073 138 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 79 124 - -
Aed1g2073 138 SUPERFAMILY Protein kinase-like (PK-like) 27 113 IPR011009 -
Aed1g2073 138 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 33 78 - -
Aed1g2073 138 Gene3D Transferase(Phosphotransferase) domain 1 67 135 - -
Aed1g2073 138 Gene3D Phosphorylase Kinase; domain 1 22 66 - -
Aed1g2073 138 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 79 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2073 Aed-Chr1 17435410 17436991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2073 6 86 Receptor kinase-like Gene Family AT4G23220 48.193 4.03e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g2073 PK_Tyr_Ser-Thr 2.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2073 - - pvu:PHAVU_007G050300g 120.168