Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2071 ATGGGTTGGAATTCCTTGAAGCTTCTCTTTTTCTTTGTCTTTGTTAGCTTCCTCCTGAGTTTTGCAAAAACAAAGGCACAGGACCCTAGTTTCCTTGCCCAGAGTTGCTCAAGCAACAGAACCACAGCCAACAGCACCTTCCAAATAAACCTGAGAAGTCTCTTCTCTTCACTATCTTCCAACGCCACCACCGGCAACAACGAATTCCACAACGCAACAGTGATAGGTACAAACCCCTCTGACACAGTCTATGGACTTTTCATGTGCAGAGGTGACCTCTCACTCTCATTTGAGGTGTGTGGACAGTGCGTTATAAACGCAACACAGGAACTAACATCAAACTCAGAGTGCTCTTTGTCGAAACAAGGTGTGATCTGGTACGACGAGTGCATGGTTCGGTATTCCAACCGCTCCTTTTTCTCCACAGCAGACACAAGGCCTGCTGTTGGCCTGCTTAACAGCGCAAATATCTCAAACCAGGCAAGCTTCATGAGTTTGATGTTTGACACCATGAACGAAACTGCAGATGAAGCAGCTAGTTCTCCTATTGGTGCCAAGAAATACGCCACGAAGCAAGCAAATATATCTGGGTTTCAGACCCTTTATTGTCTGACTCAGTGCACACCGGATTTGTCACCCCAAGGTTGCAGAGGCTGTCTTAGTGATGCCATAGGGCTCCTTCCTTGGTGCTGCGAAGGAAAACAAGGAGGGAGAATTCTAAATCCCAGCTGTAATGTTAGGTACGAATTGTACCCTTTCTATCAAACCAACGCCACTGCTTCCTCTCCATCCCCAACCCCATCAGCCTCTGTTCCTCCAACTCCTACCAATTCTTCTAACTCGGGAGGAAGTAGTGGAATTTCATCGGGAACAATAGTTGCAATTGTGGTTCCAATTGCAGTGGCTCTTCTGCTATTTATTGTGGGTATTTGGATCTTAGGTAAAAGAGCAGCAAAGAAGGGTAACGCTCCACAAAACCCAAAAACTGGAACTGAGATCAGTGCCGTGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGCAGCCACAAACAAATTCTCTGATGCTAACAAGCTAGGTGAAGGTGGTTTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGCGGACAAGAAGTGGCTGTCAAGAGACTCTCCAAAAACTCTGGACAAGGTGGGGAAGAATTTAAAAATGAAGTAGAGGTGGTTGCAAAGCTCCAACACAGAAATTTGGTGAGGCTTCTAGGATTTTGCTTGGAAGGAGAAGAAAAGATACTTGTTTACGAATTTGTAGTCAACAAAAGCCTTGATTATATTCTTTTTGATCCTGAAAAGCAAAGATCATTGGATTGGACAAGGCGTTACAAAATTGTCGAAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGACTTAAAATTATACATCGTGATCTTAAAGCTAGCAATGTATTGTTGGATCGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAATTCAAGCAAATACCAATAGAATTGTAGGGACATATGGTTACATGTCTCCGGAGTATGCTATGCATGGAGAATACTCCGGTAAGTCTGATGTATACAGTTTCGGAGTCCTGGTTTTGGAGATTATAAGTGGCAAGAAGAACAGCTCTTTCTATGAAACCGACGTTGCTGAGGATCTATTGAGCTATGGGCTGCAAATTGATCTTTCTGTTACCAAGTCAACAACAATGTCTGTCAATGAGATGTCGGTTAGTGAAGTAGATATTCCTCGATAA 1794 0.4326 MGWNSLKLLFFFVFVSFLLSFAKTKAQDPSFLAQSCSSNRTTANSTFQINLRSLFSSLSSNATTGNNEFHNATVIGTNPSDTVYGLFMCRGDLSLSFEVCGQCVINATQELTSNSECSLSKQGVIWYDECMVRYSNRSFFSTADTRPAVGLLNSANISNQASFMSLMFDTMNETADEAASSPIGAKKYATKQANISGFQTLYCLTQCTPDLSPQGCRGCLSDAIGLLPWCCEGKQGGRILNPSCNVRYELYPFYQTNATASSPSPTPSASVPPTPTNSSNSGGSSGISSGTIVAIVVPIAVALLLFIVGIWILGKRAAKKGNAPQNPKTGTEISAVESLRFDFSTIEAATNKFSDANKLGEGGFGEVYKGLLPSGQEVAVKRLSKNSGQGGEEFKNEVEVVAKLQHRNLVRLLGFCLEGEEKILVYEFVVNKSLDYILFDPEKQRSLDWTRRYKIVEGIARGIQYLHEDSRLKIIHRDLKASNVLLDRDMNPKISDFGMARIFGVDQIQANTNRIVGTYGYMSPEYAMHGEYSGKSDVYSFGVLVLEIISGKKNSSFYETDVAEDLLSYGLQIDLSVTKSTTMSVNEMSVSEVDIPR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2071 597 ProSiteProfiles Protein kinase domain profile. 353 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2071 597 Gene3D - 148 253 IPR038408 -
Aed1g2071 597 Gene3D - 28 139 IPR038408 -
Aed1g2071 597 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Aed1g2071 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Aed1g2071 597 Pfam Protein tyrosine and serine/threonine kinase 357 554 IPR001245 GO:0004672|GO:0006468
Aed1g2071 597 SUPERFAMILY Protein kinase-like (PK-like) 334 558 IPR011009 -
Aed1g2071 597 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Aed1g2071 597 CDD STKc_IRAK 359 553 - -
Aed1g2071 597 ProSiteProfiles Gnk2-homologous domain profile. 145 253 IPR002902 -
Aed1g2071 597 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 573 - -
Aed1g2071 597 Pfam Salt stress response/antifungal 156 251 IPR002902 -
Aed1g2071 597 Pfam Salt stress response/antifungal 36 136 IPR002902 -
Aed1g2071 597 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 573 - -
Aed1g2071 597 MobiDBLite consensus disorder prediction 260 283 - -
Aed1g2071 597 SMART serkin_6 353 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2071 597 Gene3D Transferase(Phosphotransferase) domain 1 430 588 - -
Aed1g2071 597 ProSiteProfiles Gnk2-homologous domain profile. 29 139 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2071 Aed-Chr1 17403814 17407040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2071 13 569 Receptor kinase-like Gene Family AT4G05200 55.993 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g2071 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2071 - - gmx:100789354 892.493