Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2067 ATGTTCTTCTTCAACAACTATGTTGATGTCAGCGTTCTTCTTCTGTTCCTGTCTATGTTTGGAATTGGATCCTCAGCAGCAGCTCCTGTTTACAGCGCTAATTACTGCCCAAATGGATCGTACAGTTCCAACGTAACATTCGAAACCAATCTCAGAGTCCTCCTCGCATCTCTGGTCTCCAACGTGTCCCAATCTGAAGGCTTCTATAACACCGCCATGGGCATGGGGACCACAAGCGTCGCCGACGGCCGATTCCTCTGCCGCGGCGACGTCTCCTCCGCCACGTGTCAAGATTGCATCAGCACCGCCGCCGCGGAAATAACGCGACTCTGCCCCAACAAAACAGAGTCTATAATATGGTACGACGAGTGCACGCTCCGTTTCACGAACCGCTACTTCTCCCCCACCAGCGCCGTCCCAAGAGCAAACTTACGGGACGAAAACAACATCTCTGCCTCCGACATGGACAGTTTTAACCGTACGTTGTTCGGGTTGTTGAACAATTTGGTGGAAGAAGCTGCGAATTCTCAGACGAATAGGAAATTCGCCACTGGCGATAGCGAATTCGCTGGGTCCTCGCCGGAGAGAACAAGGGTGTATGGCCTAGCGGAGTGCGAACCGGGAAGAACAATTTCCCAGTGTGAAGAGTGTTTGCAAAACGCCGTTTCAACTCTTCCATCGTGTTGCGCCGGAAAACAGGGCGCTAGGGCTCTGCTCGCGTGGTGCAATGTTAGATACGAGATGTTTCAGTTTTACCATACTAGCGCCACAAAAGCTCCGTCATCAGGAAAGAGCAACACAACACAAATTGTCGTTGCGGTAGTTGTGCCGACTGTTGTCATTGTTGTGCTGGTCATCTCTGTTTGCATTTTCCTTCGAGCAAGGAAGCAAAGGAAAAATGTTGACAATAAAAGTAAGACAATATTTGGATATATGGCACCCGAATATATAAGGCAAGGACAATTCTCCGTAAAGTCAGATGTTTTCAACTTTAGTGTACTGGTTCTAGAGATAGTAAGTGGCCAGAAAAATAGTGGCTTTCAACATGGAGACCATGTGGAGGATCTAATAAGCTTTGGTAATTACAGCGCTAACAGCACCTACCAGAACAACCTCAACACCCTTTTGTCCAACCTCTCTTCCAACACACAGATTGACTATGGCTTCTACAATATTTCATATGGCCAAGATAGTGACAGAGTAAACGCAATTGGGCTGTGCCGAGGAGATGTTAAGCCAGACGAGTGCCGCAAATGCTTGAACGATTCCAAAGTCCTTCTCACACAACTGTGTCCAAATCAGAAGGAGGCAATTGGGTGGTATGACAATTGCATGTTACGCTACTCCAACAGCTCAATATTCAACACCAAGGCAACTTCACCTGGCTTCTCTATGAGAAATGGAAAGAGCAACACATCTCTAACTGTAATAGCAGTAGTTGTGCCAATTGTTGCCTTTGTCATACTAGTTATCCTTTTGTGCATCTATTTAAGAATGAGGAGGTCACGGAAACCCATTGAAGTGCAAAACGCGGAAAAGCCTACTATTGTTGCTACCCACAAAATGACAAAATATGAATTTAGAACATGGAAAAATTGGAGGGGAGGGACAGCCTCAAACGTTGTTGATCCCACAATTACCGATGGTTCGAGAAATGAAATATTGAGATGTATACACATTGCGTTGCTTTGTGTTCAGGAAAATATGGCTGATAGACCAACAATGGCTTCTGTTGTTCTTATGCTTAACAGTTACTCTGTTACGCTTCCATTGCCCTCACAGCCTGCTTTCTCCATCGATAGTAGAAGTTTATCGGTGGTTCAATCAGAAGAGCATGATACAGTGGCATCAGATGAATCATCAAATGCTCAATCTGTCCAAGCATCAGTAAACGAGGCCGATGTTAAAGTTCTCTAA 1917 0.458 MFFFNNYVDVSVLLLFLSMFGIGSSAAAPVYSANYCPNGSYSSNVTFETNLRVLLASLVSNVSQSEGFYNTAMGMGTTSVADGRFLCRGDVSSATCQDCISTAAAEITRLCPNKTESIIWYDECTLRFTNRYFSPTSAVPRANLRDENNISASDMDSFNRTLFGLLNNLVEEAANSQTNRKFATGDSEFAGSSPERTRVYGLAECEPGRTISQCEECLQNAVSTLPSCCAGKQGARALLAWCNVRYEMFQFYHTSATKAPSSGKSNTTQIVVAVVVPTVVIVVLVISVCIFLRARKQRKNVDNKSKTIFGYMAPEYIRQGQFSVKSDVFNFSVLVLEIVSGQKNSGFQHGDHVEDLISFGNYSANSTYQNNLNTLLSNLSSNTQIDYGFYNISYGQDSDRVNAIGLCRGDVKPDECRKCLNDSKVLLTQLCPNQKEAIGWYDNCMLRYSNSSIFNTKATSPGFSMRNGKSNTSLTVIAVVVPIVAFVILVILLCIYLRMRRSRKPIEVQNAEKPTIVATHKMTKYEFRTWKNWRGGTASNVVDPTITDGSRNEILRCIHIALLCVQENMADRPTMASVVLMLNSYSVTLPLPSQPAFSIDSRSLSVVQSEEHDTVASDESSNAQSVQASVNEADVKVL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2067 638 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 303 359 - -
Aed1g2067 638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 529 613 - -
Aed1g2067 638 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 529 613 - -
Aed1g2067 638 MobiDBLite consensus disorder prediction 612 638 - -
Aed1g2067 638 Pfam Salt stress response/antifungal 360 450 IPR002902 -
Aed1g2067 638 Pfam Salt stress response/antifungal 153 247 IPR002902 -
Aed1g2067 638 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Aed1g2067 638 Gene3D - 351 452 IPR038408 -
Aed1g2067 638 Gene3D - 142 251 IPR038408 -
Aed1g2067 638 Gene3D - 29 133 IPR038408 -
Aed1g2067 638 ProSiteProfiles Gnk2-homologous domain profile. 350 453 IPR002902 -
Aed1g2067 638 Pfam Protein tyrosine and serine/threonine kinase 296 359 IPR001245 GO:0004672|GO:0006468
Aed1g2067 638 Gene3D Transferase(Phosphotransferase) domain 1 490 589 - -
Aed1g2067 638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 359 471 - -
Aed1g2067 638 SUPERFAMILY Protein kinase-like (PK-like) 309 608 IPR011009 -
Aed1g2067 638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 303 359 - -
Aed1g2067 638 ProSiteProfiles Gnk2-homologous domain profile. 138 251 IPR002902 -
Aed1g2067 638 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Aed1g2067 638 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 301 - -
Aed1g2067 638 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 359 471 - -
Aed1g2067 638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2067 Aed-Chr1 17366908 17378624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2067 30 606 Receptor kinase-like Gene Family AT4G21230 27.454 6.91e-49 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g2067 Stress-antifung 3.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2067 - - gmx:100790585 438.728