Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2066 ATGTTCATGGTTTCAAGAATTCAGCCCATATTTCTTTGTATCATTTTCATACTCATATCCATAACTGGATCCAACGCCCAACCAGAATTCTTAGACCACTCCTGTTCCGATGTCAACGATAACAGTTACAGTGCTAACAGCACCTACCTGAACAACCTCAACACCCTTTTATCCAACATCTCTTCCAACACACAGATTGACTATGGTTTCTACAATTTTTCTTATGGCCAAGATAGTGACAGAGTTAACGCAATTGGACTGTGCAGAGGAGATGTTAAGCCAGATGCTTGCCGCAGCTGCTTCAATGATTCCAAACTCCTTCTCGCCAAACTGTGTCCAAATCAGAAGGTGGCGATTGGGTGGTATGACAATTGCATGTTACGCTACTCCAACAGCAGCTCAATATTCAACACCAAGGAAACTTATCCTCGTGGCTATACGACCAGAGATTCAGGTAATTCAACCGATGTTGATGAGTTCAATCGACTGCTCAAGAATTTGCTATACAGCCTCGCAAACCAAGCTTCATTAGGAAAGAGCAACACATCTCGGACTCTAATTGCAATAGTTGTGCCAATTGTTGCCTTTGTCATACTAGTCAACCTTATCTGCCTCTTATTAATGAGGAGGTCATGGAAACACATTGAAGTGAAGTCTGATGTTTATAGTTTTGGTGTATTGGTTCTTGAGATTGTAAGTGGCCAGAAAAATAGTTGGGTACGTAAAGAAGAGAATGTAGAGGAGAATTTAGAGGGTCTACTAACCTCTACATGGCAAAACTGGAGGGAAGGGATGGCCACAAATATTGTTGATCCTACAATCAGTGATGGTTCGAGAAATGAAATAATGAGATGTGTCCACATTGCGTTGCTCTGTGTTCAGGAAAATATGGCTGATAGACCAACCATGGCTTCTGTTGTACTTTCGCTTAATAGCTTCTCTGCAACGCTTCCATCACCCTCGCGACCTTCTTTCTTCATTGATAGAAGTTTACCGGTCATTAAATCAGAAGAGTATGATTCACTGGCAAGAAAATCAGATGAATCAAATATTCAATCTGCTCAACCATCAGCGAATGAGACTTCGATTACTCAGCCATTTCCTCGCTAG 1110 0.4153 MFMVSRIQPIFLCIIFILISITGSNAQPEFLDHSCSDVNDNSYSANSTYLNNLNTLLSNISSNTQIDYGFYNFSYGQDSDRVNAIGLCRGDVKPDACRSCFNDSKLLLAKLCPNQKVAIGWYDNCMLRYSNSSSIFNTKETYPRGYTTRDSGNSTDVDEFNRLLKNLLYSLANQASLGKSNTSRTLIAIVVPIVAFVILVNLICLLLMRRSWKHIEVKSDVYSFGVLVLEIVSGQKNSWVRKEENVEENLEGLLTSTWQNWREGMATNIVDPTISDGSRNEIMRCVHIALLCVQENMADRPTMASVVLSLNSFSATLPSPSRPSFFIDRSLPVIKSEEYDSLARKSDESNIQSAQPSANETSITQPFPR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2066 369 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 180 - -
Aed1g2066 369 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 215 328 - -
Aed1g2066 369 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Aed1g2066 369 Gene3D - 29 133 IPR038408 -
Aed1g2066 369 MobiDBLite consensus disorder prediction 346 369 - -
Aed1g2066 369 SUPERFAMILY Protein kinase-like (PK-like) 214 330 IPR011009 -
Aed1g2066 369 CDD TM_EGFR-like 181 215 - -
Aed1g2066 369 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Aed1g2066 369 MobiDBLite consensus disorder prediction 342 369 - -
Aed1g2066 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 215 328 - -
Aed1g2066 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 180 - -
Aed1g2066 369 Gene3D Transferase(Phosphotransferase) domain 1 204 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2066 Aed-Chr1 17363059 17366429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2066 212 332 Receptor kinase-like Gene Family AT4G21400 51.240 1.23e-35 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed1g2066 Stress-antifung 4.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2066 - - gmx:113000773 217.624