Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2046 ATGCAGTTCTTTGAGGCCCACCGCATGGCCAACGTGCGTGAGCTCAACGCGCAGCTAACTGAGATCAACAACCATTTCGACGCGGAGAAGAAGCGCGCCGAGGAGCTGAATCTGCTGAAGAAGGAGGCCCAGGCCCATATATGGTGGGCCAGGCCCATTGATGGGATGAGTATGGCCCAAGTGGAGCAGTTCAAGGTGGCGCTGGAGGAGTTGAAGAAGCAGGTGGCGCGCCTTGCTGATAGGGCCATGCTTCAGAGTGTTACAAACCCAACTCTTCAATTTTTCCCAGGGGTTTCTTCCCATTCCAACCTCGTGCATCAGCCACAGCCACACCCACTGCAACCCCAGGTGTTCCCGCCACACATGATTCAGCCACCAATGCTTCAGGACTTTATGTATCATGGCGGGAGCATGATGCGCCACCATGGCTTTAATAACATGGGAATGGGAGGAGGATATGGACCTCCTGGAGGTTTCTTTTGA 483 0.5445 MQFFEAHRMANVRELNAQLTEINNHFDAEKKRAEELNLLKKEAQAHIWWARPIDGMSMAQVEQFKVALEELKKQVARLADRAMLQSVTNPTLQFFPGVSSHSNLVHQPQPHPLQPQVFPPHMIQPPMLQDFMYHGGSMMRHHGFNNMGMGGGYGPPGGFF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2046 160 Coils Coil 61 81 - -
Aed1g2046 160 PANTHER MADS BOX PROTEIN 2 109 - -
Aed1g2046 160 Coils Coil 12 46 - -
Aed1g2046 160 Gene3D - 1 92 - -
Aed1g2046 160 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL62 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2046 Aed-Chr1 17197567 17198049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2046 1 102 Type I MADS-box Gene Family AT5G60440 34.951 9.73e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2046 - - gmx:100780445 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2046 1 17197567 17198049 Aed1g2046 1 17197567 17198049 ECH